Burkholderia thailandensis H0587: BTL_4121
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Entry
BTL_4121 CDS
T03113
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
btz
Burkholderia thailandensis H0587
Pathway
btz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BTL_4121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btz03021
]
BTL_4121
Transcription machinery [BR:
btz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BTL_4121
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_7
HTH_29
GerE
HTH_40
HTH_24
SaeA_1st
TnsD
HTH_20
HTH_11
KorB
Motif
Other DBs
NCBI-ProteinID:
AHI67942
LinkDB
All DBs
Position
2:complement(923257..923766)
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AA seq
169 aa
AA seq
DB search
MPGNTLRLQREIAALYTGHRGWLHGWLQKKLGCGERAADLVHDTFIRLLARDEPIDAAEP
RAFLTTVAQRVLFNHWRRERLERAYLDALARLPEAVAPSPETRAILFETLVEIDRMLDGL
PAAVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaacactctgcgtctgcagcgggagatcgctgcgctctacaccggtcatcgc
ggctggctgcacggctggctgcagaagaagctcggttgcggcgagcgcgcggccgacctc
gtccacgacacgttcatccgcctgctcgcgcgcgacgagccgatcgacgcggccgagccg
cgcgcgttcctgacgaccgtcgcgcaacgcgtgctgttcaaccactggcggcgcgagcgg
ctcgagcgcgcatatctcgacgcgctcgcgcggctgccggaggcggtcgcgccgtcgccg
gagacgcgcgcgatcctgttcgagacgctcgtcgagatcgaccggatgctcgacgggctg
cccgccgcggtcaggcgtgcgttcctgctcgcgcagctcgacgggatgacgcacgcgcag
atcgcggccgagcttcgcgtgtcgctcgcgaccgtcaagcgttatctggtgaaggcgggc
gcgcagtgctacttcgcgatcgccgcatga
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integrated database retrieval system
