Buchnera aphidicola LL01 (Acyrthosiphon pisum): CWO_01980
Help
Entry
CWO_01980 CDS
T01828
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bua
Buchnera aphidicola LL01 (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
bua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bua03016
]
CWO_01980 (truB)
Enzymes [BR:
bua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CWO_01980 (truB)
Transfer RNA biogenesis [BR:
bua03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CWO_01980 (truB)
Prokaryotic type
CWO_01980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADP66194
LinkDB
All DBs
Position
complement(415263..416201)
Genome browser
AA seq
312 aa
AA seq
DB search
MFFHKKRDVHGLLLLDKPQGISSNNALQKVKMLFSAKKAGYIGTLDPLATGMLPICFGEC
SKFSHYLMESNKKYHVIAKLGEKTSTSDSDGIIIKKRPILINSFKIKSALKELTGLIEQI
PPMYSAIKHNGVPLYKYARQGLNIKRSIRKVLIHDISSIHQEKNLIEFKIFCSKGTYVRT
LVEDLGEKLGCGAHVIFLRRLEMASYLHSQLVTISYLHKLLRKEKNNNFNFFEKIDNLLM
PIDSPVSFLPKVYLFPQQSYNFQLGQTVIFFSDIKNSLVRVIALENNKFIGLGRIDTEEL
LIPYRLVSRSIN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcataaaaaacgcgatgttcatggattacttttactagataaaccacaggga
atatcttctaataatgccttacaaaaagttaagatgctttttagtgcaaaaaaagcaggt
tatattggtactctagatccgttagcaacaggtatgctaccaatttgttttggagaatgt
tcaaaattttctcattatttaatggaatctaataaaaaatatcatgttattgctaaatta
ggggaaaaaacatctacatctgattctgatggaattatcataaaaaaacgccctatttta
attaattcttttaaaataaaatctgctctcaaggagttaactggtttgattgaacaaatt
cctccaatgtattctgcaatcaaacataatggtgtgcccttatataaatatgcacgtcaa
ggattaaatattaagcgtagtataagaaaagttcttatacatgatataagttctattcat
caagaaaaaaacttaatcgaatttaaaatattttgttcaaaaggaacatatgttcgcaca
ttagtggaggatttaggggaaaaattaggttgtggagctcatgtgatttttttacgtcgt
ttagaaatggcttcatatcttcatagtcaactagtcacaatttcatatttacataaatta
ttaagaaaagaaaaaaacaataattttaatttcttcgaaaaaatagataatttattaatg
cctatagatagccctgtatcttttttacctaaagtatatctttttcctcaacaatcatat
aattttcaattaggacaaactgtaatttttttttctgacatcaaaaatagtctagtacgt
gtaatagcattagaaaataataaatttattggattaggaagaattgatacagaagaatta
ttgattccatatagattagtttctagatctattaattaa
DBGET
integrated database retrieval system
