Burkholderia ubonensis: BW23_1079
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Entry
BW23_1079 CDS
T03794
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03030
DNA replication
bub03430
Mismatch repair
bub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BW23_1079 (holA)
03430 Mismatch repair
BW23_1079 (holA)
03440 Homologous recombination
BW23_1079 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bub03032
]
BW23_1079 (holA)
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_1079 (holA)
Enzymes [BR:
bub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BW23_1079 (holA)
DNA replication proteins [BR:
bub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BW23_1079 (holA)
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BW23_1079 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AJX17818
LinkDB
All DBs
Position
I:complement(1159159..1160265)
Genome browser
AA seq
368 aa
AA seq
DB search
MQLRLDALEPHLAKGLAGLYTVFGDEPLLAQEACDRIRAAARAAGFTERSVHTVERGFDW
SLLLGATQAMSLFGERQLIELRIPSGKPGKEGADALKALAAANNPDALVLVTLPRLDAAT
QKSAWFTALLNGGVALKIDPVDRAQLPNWIGQRLAMQGQRVAAGEDGRRALQFIAERVEG
NLLAAHQEIQKLGLLYPQGALSFEQVHDAVLNVARYDVFKLNEAMLAGDAARLARMIDGL
KGEGEAIVLVMWAVVEELRTLLRIKRGVAAGKPLATLLRENRVWGPRERLVGPALGRVTE
AALEKALAFAARLDRQVKGLSAVTPGRRTQDEPPPDPWDGLFQLAMTVAGAQGAQGERPP
TAGRGVRR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgactagacgcgctggagccgcacctcgcgaaggggctggccgggctctac
acggtattcggcgacgagccgctgctcgcgcaggaagcgtgcgaccggatccgcgccgcc
gcgcgtgcggccggcttcaccgagcgctcggtgcacacggtcgagcgcggcttcgactgg
agcctgctgctcggcgcaacccaggcgatgtcgctgttcggcgagcgccagctgatcgag
ctgcgcattccgtcgggcaagcccggcaaggaaggcgccgacgcgctgaaggcgctcgcc
gccgcgaacaatccggacgcgctggtgctcgtcacgctgccgcgcctcgatgcggcgacg
cagaaatccgcgtggttcaccgcgctcctgaacggcggcgtcgcgctgaagatcgatccg
gtcgaccgcgcgcagttgccgaactggatcggccagcgcctcgcgatgcagggccagcgc
gtcgcggccggcgaggatggccggcgcgcgctgcagttcatcgcggagcgcgtcgagggc
aacctgctcgccgcgcaccaggaaatccagaagctcggcctgctgtatccgcagggtgcg
ctgtcgttcgagcaggtgcacgacgcggtgctgaacgtcgcgcgctacgacgtcttcaag
ctgaacgaggcgatgctcgccggcgatgccgcgcggctcgcgcggatgatcgacggcctg
aagggcgagggcgaggcgatcgtgctcgtgatgtgggcagtcgtcgaggaactgcgcacg
ctgctgcggatcaagcgcggcgtcgcggccggcaagccgctcgcgacgctgctgcgcgag
aaccgtgtatgggggccgcgcgagcggctggtcggccccgcgctcggccgcgtgaccgaa
gccgcgctcgagaaggcgctggcgttcgccgcgcggctcgaccggcaggtcaagggcctg
tccgcggtgacgccgggccggcgcacgcaggacgaaccgccgcccgacccgtgggacggc
ctgttccagctcgcgatgacggtcgcgggtgcgcagggtgcgcaaggcgagcgaccgccg
accgcgggtcgcggcgtgcggcgctaa
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