Burkholderia ubonensis: BW23_1125
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Entry
BW23_1125 CDS
T03794
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bub
Burkholderia ubonensis
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bub03016
]
BW23_1125
Enzymes [BR:
bub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BW23_1125
Transfer RNA biogenesis [BR:
bub03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BW23_1125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AJX16629
LinkDB
All DBs
Position
I:complement(1209649..1211736)
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AA seq
695 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQQADAA
AQEIDLDFLWECAPAEEFAYTALAAEYFGETYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPAAFDGKVLGLLTRPDKNAIEYKA
LEAAAGALGVSPARLMLDCGGIASARALHEARFLAEFFPHGTGFPPVTVGSLPDDLPRAD
VNAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIVRGDAVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRDTQEIVASETRAERVFVKNNLRHNT
LDELVTEQTLADGSGDYPHKDDIAVLWPLAQALFEKRQLARAGYGLKREVQRNTDYNFYV
DGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYSAYADYQRRMEYFWCLRWLVQEGKKQVVASVVKGDLVRLEDVPLLLHVPALG
VHARGTRVLLDVMSIDELTIEASVRLVNVLDVPVAAGGEAAEEEEEGENGDDVLLDAGDA
SAQAEAEALAEADAGPAEGDGAAAESNGNEEERAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagctgcccggcgggcggcgcgcgaaggtgcgcgcgaaggac
gtgctgatcgaattcgagaagccggccgcgagcgagctgatgcagcaggccgacgcggcc
gcgcaggagatcgacctggatttcctgtgggaatgcgcgccggcggaggaattcgcgtat
acggcgctcgccgcggaatacttcggcgagacctacggcccggtcgagcgcgcggcgctg
gtgctgcgcctgcacggctcgcccgtctacttccgccgcaaggggcgcgggcagtaccag
cgcgcgccggaagagcagttgaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtgcaggcgcagtacgaggaagagctgaaggccggcaagctgcccgccgcgttc
gacggcaaggtgctcgggctgctgacgcgcccggacaagaacgcgatcgaatacaaggcg
ctcgaggcggcggccggtgcgctgggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgcgtcggcgcgcgcgctgcacgaggcgcgcttcctcgccgaattcttcccgcac
ggcacgggcttcccgccggtgacggtcggcagcctgccggacgacctgccgcgcgccgac
gtcaacgccttctcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctcggtc
gagcacctggccgacggccgcgtgcggatcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggcgatgcggtcgacgcgatcgcgcgcacgcgcctgtcgaccgtctacatg
cccggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgactaccgcccggcgctgtcgctgtacatcatcgtgaaccgcgatacgcaggagatc
gtcgcgagcgagacgcgcgcggaacgcgtgttcgtcaagaacaacctgcgccacaacacg
ctcgacgagctcgtcaccgaacagacgctcgccgacggcagcggcgactatccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaactggcg
cgcgcgggctacggcctgaagcgcgaggtgcagcgcaacaccgactacaatttctacgtc
gacggcgaacacgtgacgatcacgccgcgccggcgcggctcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacgtggggcgcgttcctgcacgaccacacggtg
ccggggatctatcgctcgcagcggggcttcggcgcgccgggcccgaagcgcacgcgcatg
cagacgagcgccgcgccgcacgaaggcctcggcgtgccgcagtacgcatggagcacgtcg
ccgctgcgccgctacgtcgacctcgtcaaccagtggcagctgctcgcatgcgtgcagcat
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggacgccgacctgtacgcggtc
gtgcagggcttcgacgacacctattccgcgtacgccgactaccagcgccggatggaatac
ttctggtgcctgcgctggctcgtccaggaaggcaagaagcaggtcgtcgcgagcgtcgtg
aagggggacctcgtgcgtctcgaggacgtgccgctgctgctgcacgtgccggcgctcggc
gtgcatgcgcgcggcacccgcgtgctgctcgacgtgatgtcgatcgacgagctgacgatc
gaggcgtcggtgcggctggtcaacgtgctcgacgtgccggtcgcggcgggcggcgaagcg
gccgaagaagaggaggagggcgagaacggcgacgacgtgctgctcgacgcgggcgacgcg
tcggcgcaagccgaggccgaagcgctcgccgaggcggatgccggcccggcggaaggcgat
ggcgccgcggcggaaagcaacggcaacgaggaggagcgcgcatcatga
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