Burkholderia ubonensis: BW23_2342
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Entry
BW23_2342 CDS
T03794
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BW23_2342 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_2342 (xseA)
Enzymes [BR:
bub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BW23_2342 (xseA)
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BW23_2342 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AJX15886
LinkDB
All DBs
Position
I:2518756..2520138
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AA seq
460 aa
AA seq
DB search
MLSDSSFTAPGATRGGDEVIPVSALNRAISTMLERSFPLLWVAGEVSNFTRAASGHWYFS
IKDQQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRL
YEAFLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLHAAALRDVLTTLARRAPHVPVI
VYPAPVQGAGSAEKLVAAVETANARGEVDVLLVCRGGGSIEDLWSFNDEALARAIAASAL
PVVSGVGHETDFTIADFAADVRAPTPTGAAELASPQRALLLREVSDRQGALARGMRRVLE
QRAQQLDWLARRLVSPAERLQRQRTHVEQLAVRLASAAARPVRDARARFALAQLRWQRAR
PDVTQARHALAGLEQRLSVALQRRHERDTARVAACAARLEVLSPQRTLERGYAALIDAQT
GRAVRAPSALKPQRRLTVHLAEGSADVSLADVQPRLSDTF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgactcctcatttaccgcgccgggcgcgacgcgcggcggcgacgaagtgatc
cccgtctcggccctcaaccgcgcgatttcgacgatgctcgagcgctcgtttccgctgctg
tgggtcgcgggcgaagtgtcgaacttcacgcgcgccgcgagcggccactggtatttctcg
atcaaggaccagcaggcgcagatgcgctgcgtgatgttccgcggccgcgcgcaatacgcg
gagttcacgccgcgcgaaggcgaccggatcgaggtgcgcgcggtcgtcacgatgtacgag
ccgcgcggcgaggtgcagctcaacgtcgaggccgtgcggcgcaccgggcaggggcgtctg
tacgaggcgttcctgcggctcaaggcgcagctcgaggcggagggcctgttcgcgcccgag
cgcaagcggccgctgcccgcgcatccgcgcgcgatcggcatcgtcacgtcgctgcacgcc
gccgcgctgcgcgacgtgctgaccacgctcgcgcgccgcgcgccgcacgtgccggtgatc
gtctatccggcgcccgtgcagggcgcgggttcggccgagaagctcgtcgcggcggtcgag
accgccaacgcgcggggcgaggtcgacgtgctgctcgtatgccgcggcggcggctcgatc
gaggatctgtggtcgttcaacgacgaggcgctcgcgcgcgcgatcgccgcgagcgcgctg
cccgtcgtcagcggcgtcgggcacgaaaccgatttcacgattgccgatttcgccgccgac
gtgcgtgcgccgacgccgaccggcgcggccgaactggcgagcccgcagcgcgcgctgctg
ctgcgcgaggtgagcgaccggcagggcgcgctcgcgcgcggaatgcgccgcgtgctcgaa
cagcgtgcgcagcagctcgactggctcgcgcgccggctcgtcagcccggccgaacggctg
cagcggcagcgcacgcatgtcgagcagctcgcggtgcgcctcgcgtccgcggcggcgcgg
ccggtgcgcgacgcgcgcgcccgcttcgcgcttgcgcaattgcgctggcagcgcgcgcgg
cccgacgtgacgcaggcgcgtcacgcgctcgccgggctggagcagcgtctttcggtcgcg
ctgcagcgccgccacgaacgcgacacggcgcgcgtggcagcctgtgcggcgcggctcgag
gtgctgagcccgcaacgcacgctcgagcgcggctatgcggcgctcatcgatgcgcagacg
ggccgcgcggtgcgcgcgccgagtgcgctgaagccgcagcggcggctgaccgtgcatctc
gccgaaggctcggcggacgtgtcgctcgccgacgtgcagccgcggctgtcggatacgttc
tga
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