Burkholderia ubonensis: BW23_245
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Entry
BW23_245 CDS
T03794
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bub
Burkholderia ubonensis
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bub03016
]
BW23_245 (truB)
Enzymes [BR:
bub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BW23_245 (truB)
Transfer RNA biogenesis [BR:
bub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BW23_245 (truB)
Prokaryotic type
BW23_245 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJX17548
LinkDB
All DBs
Position
I:complement(274594..275526)
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AA seq
310 aa
AA seq
DB search
MTTAASQRPRVPRRALDGVLLLDKPVGLSSNDALIRAKRLYLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGVRTATGDAEGEVLDTRPVECDRVAVEAALERF
IGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHRLELLACDLPDVTFRVTCS
KGTYVRTLAEDLGEALGCGAHLTMLRRTGVGALTLDHAVTLDALSDADDAARDAWLQPVD
ALLSTFPMVRLDDACAKRFLHGQRLKLSEIARIDASEGERVRVYDATRLLGVARAANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagcagcatcccaacgtccgcgcgtgccccggcgcgcgctggacggcgtcctt
ctgctcgacaagccggtcggcctgtccagcaacgatgccctgattcgcgcgaagcgcctc
tatctcgcgaaaaaggccggccataccggcacgctcgatccgctggcctcgggcctgttg
ccgctgtgcttcggcgaagcgacgaagttctcgcaggacctgcttgaggccgacaagacc
tacgaggcgacgatgcgcctcggcgtgcgcaccgcgaccggcgacgcggaaggagaggtg
ctcgacacgcggccggtcgaatgcgaccgggtggccgtggaagcggcgctcgagcgcttc
ataggcgaaatcgtgcaggtgccgccgatgtactccgcgctcaagcgcgacggcaagccg
ctctacgaatatgcgcgcgccggccagacggtcgagcgcgaagggcgcaacgtgacgatc
caccggctcgaactgctcgcgtgcgacctgccggacgtgacgttccgcgtgacctgcagt
aaaggcacgtacgtgcgcacgctcgcggaagatctcggcgaggcgctcggctgcggcgcg
cacttgacgatgctgcgccgcaccggggtcggcgcattgacgctcgaccatgcggtgacg
ctcgatgcgctgtccgatgccgacgatgccgcgcgcgacgcatggcttcagcctgtcgac
gcgctgctgtcgacgtttccgatggtgcggctcgacgacgcgtgcgcgaagcgcttcctg
cacggccagcgcctgaaactgtcggagatcgcgcgtatcgacgcgagcgaaggcgagcgg
gtgagggtctacgatgcgacgcggctgcttggcgtggcccgcgcggcgaatggcgtgctg
gcgcctgaacggctcgtcgtgacggcggcgtga
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