Burkholderia ubonensis: BW23_2800
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Entry
BW23_2800 CDS
T03794
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bub
Burkholderia ubonensis
Pathway
bub03410
Base excision repair
bub03430
Mismatch repair
bub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BW23_2800 (recJ)
03430 Mismatch repair
BW23_2800 (recJ)
03440 Homologous recombination
BW23_2800 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_2800 (recJ)
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BW23_2800 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BW23_2800 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BW23_2800 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AJX17691
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Position
I:complement(3020297..3021994)
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AA seq
565 aa
AA seq
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MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPSDIETALARLVPPTELKGCADA
AALLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVAGVEAANARGINVLVTDHHLPGDALPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGVAALFRAAARDARTASGFDLGFGLGPRLNAAGRLSDMSL
GIECLITDDVGRAWELAQQLDTMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
HQGVIGIVAGRLKEKFHRPSFTFAHADEHGARVKGSGRSIPGFHLRDALDLVSKREPDLI
VAFGGHAMAAGVTLDTANVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKDKHLKLQLARGRQRFNAIWFNRTEPLPASAL
IAYRLVADTWNGVTRVQLIVEHAGG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtatcgttacccgccccgtcgcgcccgccgacgccgaagcgctcgcgcgccac
ggcctgcacccggtgctcgcgcgcctgtacgcctcgcgcggcgtgcaatccccgtccgac
atcgagaccgcgctcgcgcgcctcgtgccgcccaccgagctgaaaggctgcgccgacgcg
gccgcgctgctcgccgacgcgatcgccgacaagcggcgcctgctcgtcgtcgccgactac
gactgcgacggcgcgaccgcctgcgcggtcgcagtgcgcgggctgcggatgttcggcgcg
cagatcgactatctggtgccgaaccgcttcgagtacggctacggcctcacgcccgagatc
gtcgagctggcggccgcgcgcaagccggacctgctgatcaccgtcgacaacggcatcgcg
agcgtcgcgggcgtcgaagccgcgaacgcgcgcgggatcaacgtgctggtcaccgaccat
cacctgcccggcgacgcgctgcccgccgcgcgcgcgatcgtcaacccgaaccagccgggc
tgcgcgttcccgagcaagcacatcgccggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgccgccgcggcgcgttcgccagcaaggaggccgagccgcgcctc
gacggcctgctcgacctcgtcgcgctcggcaccgtcgccgacgtcgtgcggctcgacggc
aacaaccgcgtgctggtcgcgcaggggctgcagcgcatccgcaacggccggatgcagccg
ggcgtcgccgcgctgttccgcgcagccgcccgcgacgcgcgcaccgcgtcgggcttcgat
ctcggcttcggcctcgggccgcggctgaacgcggccggccggctgtccgacatgtcgctc
ggcatcgagtgcctgatcaccgacgacgtcggccgcgcgtgggagctcgcgcagcagctc
gacacgatgaaccgcgagcgccgtgaaatcgaggccgggatgcagcagcaggcgctcgcc
gatctcgccgacgtcgatccggccgacgcgtgcacgatcaccctcttcaatcccgaatgg
caccagggcgtgatcggcatcgtcgccggacgcctgaaggaaaaattccaccggccgtcg
ttcacgttcgcgcacgcggacgagcacggcgcgcgcgtcaagggctccgggcgatcgatc
cccggcttccacctgcgcgacgcgctcgacctggtgtcgaagcgcgagccggacctgatc
gtcgcgttcggcggccacgcgatggcggccggcgtcacgctcgacaccgcgaacgtgccg
cgcttcgcggccgcgttcgaggcggtcgcgcgcgaatggctgtcggacgacgcgctcgcc
cgcgtgatcgagaccgacggcgagctcgaggacgcctacttcacgccgcagttcgtcggg
ctgctcgacgaggccgtctggggccagggctttccggccccgctgttctcgggcgaattc
gacgtcgtgtcgcagtccctcgtgaaggacaagcacctgaagctgcagctcgcgcgcggc
cgccaacgcttcaacgcgatctggttcaaccgcacggagccgctgccggcgagcgcgctc
atcgcataccgcctcgtcgccgacacgtggaacggcgtcacgcgcgtgcagctgatcgtc
gagcacgcgggcggctga
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