Burkholderia ubonensis: BW23_2905
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Entry
BW23_2905 CDS
T03794
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BW23_2905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_2905
Enzymes [BR:
bub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BW23_2905
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BW23_2905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJX17251
LinkDB
All DBs
Position
I:3121555..3122355
Genome browser
AA seq
266 aa
AA seq
DB search
MATARKAPVKRATHVAARPAAKRAPAAKADAKRVAPNGASLNGHTQPPAAKPAQIDGVDV
VVRPAYWDKACADLVKRDRIMKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVASAQSV
WASIEAASPKLAPQQVIKLGPDKLIACGLSKRKTEYILDVAQHFVSGALHVDKWTSMEDE
DVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREV
AANWEPWRTVATWYMWRSLDSLDTGA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccagaaaagcgccggtcaagcgcgcgacgcacgtcgctgcgcgtccggca
gccaagcgtgcgccggcggcgaaggcggacgcgaaacgcgtcgcgccgaacggcgcctcg
ctcaacggtcacacgcagccgccggcggcgaagccggcgcagatcgacggcgtcgacgtc
gtcgtgcgacccgcatactgggacaaggcatgcgcggatctcgtcaagcgcgaccgcatc
atgaagaagctgatcccgaagttcggccccgcgcatctcgtcaagcgcggcgatccgttc
gtcacgctcgcgcgctcggtggtcggccagcagatctcggtggcgtccgcgcagtcggtg
tgggcgagcatcgaggcggccagtccgaagctcgcgccgcagcaggtgatcaagctcggt
ccggacaagctgatcgcgtgcgggttgtcgaagcgcaagacggaatacattctcgacgtc
gcgcagcacttcgtgtcgggcgcgctgcacgtcgacaagtggacgtcgatggaagacgag
gacgtgatcgcggaactcacgcagatccgcggcatcagccgctggacggcggagatgttc
ctgatcttcaacctgtcgcgtccggacgtgctgccgctcgacgatcccggcctgatccgc
gcgatcagcgtcaattatttcagcggggagccggtcacgcgcagcgaggcgcgggaagtg
gcggccaactgggagccgtggcgcaccgtcgcgacctggtacatgtggcgcagcctggac
tcgctggacaccggggcctga
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