Burkholderia ubonensis: BW23_304
Help
Entry
BW23_304 CDS
T03794
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03420
Nucleotide excision repair
bub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BW23_304
03430 Mismatch repair
BW23_304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_304
Enzymes [BR:
bub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BW23_304
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BW23_304
MMR (mismatch excision repair)
Other MMR factors
BW23_304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJX15576
LinkDB
All DBs
Position
I:complement(335694..338057)
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPATVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTSDQLSA
IKRLMKGANIDDEKYPPKNVQYFINNAKEQGLRPDKVDATDSFNRKFVEIYQAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGGQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANHLISNNAHR
LGKNLRTDAGHGEPVRVYEATTDSQEAGWIVEEVRSLINTGMARSEVAILYRSNAQSRAI
EHTLMTAGIPYRVYGGLRFFERQEIKHALAYLRLIDNPNDDTAFARVVNFPARGIGARSI
EQLADAARLYGCAMAAAIPYVTGKAGTSLGAFANLIAKMRADTQQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDTPARAIPLRAGAIAAPELGAAAD
GAVVDVLDPAAPGDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FAAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPQHVLKWLTPKVEAGARWGGGRSDNAGWGRDWFARPGAGREQIVDAAVSA
PLPAFANQQRAADTGFRVGQQVFHTKFGEGTVTALEGNGADAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgcgaatctcaaccctgaacaatacgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcgggggcgggcagcggcaagacgcgggtgctgatcacgcgg
atcgcgtggctgatccagcaaggctacgcgtcgcccgcgaccgtgctcgccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcggctgtcggcgatgatgccgatcgatacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcgcgcactac
cgcgacgcgggcctgccgcagaccttccagatcctcgacacgtccgaccagctgtccgcg
atcaagcggctgatgaagggcgcgaacatcgacgacgagaaatatccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcggccggacaaggtcgacgcgacc
gacagcttcaaccgcaagttcgtcgagatctaccaggcgtacgaccagcagtgccagcgc
gaaggcgtcgtcgacttccccgagctgctgctgcgctgctacgagctgctcgcgcacaac
ccgccgctgcgcgcgcattaccaggcgcgcttcaagcacatcctcgtcgacgagttccag
gatacgaacaagctgcagtacgcgtggctcaagctgctcgcgggcggccagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaggacgagttccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgacgcggcgaaccacctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgcaccgacgccggccacggcgagcccgtgcgcgtatacgaggcg
acgaccgattcgcaggaagccggctggatcgtcgaggaggtccgctcgctgatcaatacc
gggatggcgcgcagcgaggtcgcgatcctgtaccgcagcaacgcgcagtcgcgcgcgatc
gagcacacgctgatgacggccggcatcccgtaccgcgtgtacggcggcctgcgcttcttc
gagcggcaggaaatcaagcacgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgcgcgcgtcgtgaacttcccggcgcgcggcatcggcgcgcgctcgatc
gagcagctcgccgacgcggcgcgcctgtacggctgcgcgatggccgccgcgatcccgtac
gtgaccggcaaggccggcacgagcctcggcgcgttcgcgaacctgatcgcgaagatgcgc
gccgacacgcagcagatgagcctgccggagacggtcgaatacgtcgtgcgcgcgagcggc
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgcctcgagaacttgcaggaa
ctcgtcaacgcggcgaccgcgttcgtcagcgaggaaggctacgggctcgacacgccggcc
cgcgcgatcccgctgcgcgcgggcgcgatcgcggcgcccgagctcggcgcggcggcggac
ggcgccgtcgtcgacgtgctcgacccggcggccccgggcgaccctgcgcaaaatcccgac
acgatgacgccgctcgcgggcttcctgtcgcacgcgtcgctcgaggccggcgacaaccag
gcgcaggccggccaggacgcggtgcagttgatgacggtgcatgcggcgaagggcctcgaa
ttcgcggcggtgttcatcaccggtctcgaggaggggctgttcccgcacgagaacagcgtg
ctcgaatccgacggcctcgaggaggagcgccgcctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacgggcagacgcgctac
aacgtgcgctcgcgcttcttcgacgagttgccgcagcacgtgctgaagtggctgacgccg
aaggtcgaggcgggcgcgcgctggggcggcggccgcagcgacaacgcgggctggggccgc
gactggttcgcgcggccgggcgccgggcgcgagcagatcgtcgacgcggccgtgtcggcg
ccgctgcccgcgttcgcgaaccagcagcgcgcggccgacaccggcttccgggtcggccag
caggtgttccacaccaaattcggcgaaggcaccgtcaccgcgctcgaaggcaacggcgcg
gatgcgaaggcccaggtgaaattcaagcggcacggcgagaaatggctcgcgctcgcggtc
gctaagctgcaggcggtggaatga
DBGET
integrated database retrieval system
