KEGG   Burkholderia ubonensis: BW23_3459
Entry
BW23_3459         CDS       T03794                                 
Name
(GenBank) helix-turn-helix domain protein
  KO
K17736  AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
bub  Burkholderia ubonensis
Brite
KEGG Orthology (KO) [BR:bub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bub03000]
    BW23_3459
Transcription factors [BR:bub03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    BW23_3459
SSDB
Motif
Pfam: HTH_18 HTH_AraC DJ-1_PfpI Zn_ribbon_LapB
Other DBs
NCBI-ProteinID: AJX12214
LinkDB
Position
II:175436..176380
AA seq 314 aa
MPEDFHFLLLPGFSALGFMSAVEPLRVANRFRAQLYRWHVLSADGGPVAASNGIPVAAEA
AYADVERVGTVFVVAGFDPLVCYTRALGDWLRRQHRHGATLGGIDTGSFVLAEAGLFDAS
HPLTLHWEALAAFRERYPGLKATQELFEIGERRITCAGGTASIDMMLDLIGRRHGADLAA
AISEQFVVSRIRQRSDSQRLEIAARYGVHNRKLIQVIGTMQRHMETPLGPDALADEVAIT
RRQLERLFSATLNDTPTRFYLNLRLDRARELLQQTDMSITSVCVACGFESPSHFSRTYRT
RFGMSPRSDRRALR
NT seq 945 nt   +upstreamnt  +downstreamnt
atgcccgaggatttccacttcctgctgctgcccggcttctccgcactcggcttcatgtca
gcggtcgagccactgcgcgtcgcgaaccgctttcgcgcgcagctttaccgctggcacgtg
ctcagcgcggacggcggcccggtggccgccagcaacggcatcccggtcgccgcggaggcc
gcgtatgcggacgtggagcgcgtcggcacggtgttcgtcgtcgcgggcttcgacccgctc
gtctgctacacgcgcgcgctcggcgactggctgcggcgccagcaccggcacggcgcgacg
ctcggcggcatcgataccggcagcttcgtgctcgccgaggccgggctgttcgatgcgtcg
catccgctcacgctgcactgggaagcgcttgccgcgttccgcgagcgctacccgggcctg
aaggcgacgcaggagctgttcgagatcggcgagcggcgcatcacctgcgcgggcggcacc
gcgtcgatcgacatgatgctcgacctgatcggacgacggcacggcgcggacctcgcggcg
gcgatctccgagcagttcgtcgtcagccggatccgccagcgctcggacagccagcggctc
gagatcgccgcgcgctacggcgtgcacaaccgcaagctgatccaggtgatcggcacgatg
cagcgccacatggagactccgctcgggcccgacgcgctcgccgacgaagtcgcgatcacg
cggcgccagctcgagcggctgttcagcgcgacgctgaacgacacgccgacgcgcttctac
ctgaacctgcggctcgaccgcgcgcgcgagctgctgcagcagaccgacatgagcatcacg
tcggtgtgcgtcgcgtgcggcttcgaatcgccgtcgcacttctcgcgcacctatcgcacg
cgtttcgggatgagcccgcgcagcgaccgccgcgcgctgcgctga

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