Burkholderia ubonensis: BW23_3903
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Entry
BW23_3903 CDS
T03794
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bub
Burkholderia ubonensis
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bub03000
]
BW23_3903 (prpR)
Transcription factors [BR:
bub03000
]
Prokaryotic type
Helix-turn-helix
Other families
BW23_3903 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_4
AAA_2
PAS
AAA
AAA_16
PAS_8
AAA_3
AAA_7
DUF6262
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJX14033
LinkDB
All DBs
Position
II:692154..694139
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AA seq
661 aa
AA seq
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MDLSSIKPVGPADRAVRPRIWAMGISRLRDLFREIAGEFDERADVRIVSRAYEEALNAIA
EAGAARPDVIVAAGSNGSFLKTRAPVPVVVVTPTGFDVMQALARARRDASRIALVSVGET
PPEVRRFVAAYGLDVEFASYQSAQEAETCVHDLRDRGIETIVGPGLVTDLAASAGMGAVF
LYSHASVRKAVDTALEVAYATHAEALRRQRLDNLLQHLRDGVVALDARGRVEAINERLAL
ALGVEPAAAVGRALVDLTPELRTLRGDDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTF
QESRAVERLDRALRSQPGTQQFAARYTLDDVVGASAPMTRVRDLVRRYAKSDATVLVLGE
SGTGKEMIAQSLHALSARRSYPFVAINCGAFPEALLESELFGYEEGAFTGARRGGKTGLF
EAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV
EDGTFRADLYYRLNILNVGLPPLRERPADIPALAAALLAQAARREPRLADSLRDAGDAAR
VLDAAQAILMRYRWPGNVRELQNVIERIAVELAEEAGDDGQAAPCGVLDPDALQAIAPEL
FASPADAGADPDDAPTLQARRRRAEADEIRAALDACGGDRDRACAMLGISKTTMWRKLSG
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcctcgatcaagcccgtcggccccgccgaccgcgcggtgcggccgcgcatc
tgggcgatgggcatcagccgcctgcgggatctctttcgcgagatcgccggcgaattcgac
gaacgcgccgacgtgcgcatcgtgtcgcgcgcgtatgaagaggcgctcaacgcgatcgcg
gaggccggcgccgcgcggcccgacgtgatcgtcgcggccggctcgaacggcagcttcctg
aaaacgcgcgcgccggtgccggtcgtggtcgtcacgccgaccggcttcgacgtgatgcag
gcgctcgcgcgggcccggcgcgacgcgtcgcggatcgcgctcgtcagcgtcggcgagacg
ccgcccgaggtgcgccgcttcgtcgccgcgtacggcctcgacgtcgagtttgcgtcatat
cagtccgcgcaggaagcggaaacctgcgtgcacgacctgcgcgaccgcggcatcgagacg
atcgtcggccccggcctcgtcaccgacctggccgcgagcgccggcatgggcgccgtgttc
ctgtattcgcatgcgtcggtgcgcaaggccgtcgacaccgcgctcgaagtcgcctatgcg
acgcacgcggaggcgctgcgccgccagcgcctcgacaacctgctccagcacctgcgcgac
ggcgtcgtcgcgctcgatgcgcgcgggcgcgtcgaggcgatcaacgagcggctcgcgctc
gcgctcggggtcgaacccgcggcggccgtcgggcgcgcgctggtcgacctgacgccggag
ctgcgcacgctgcgcggcgacgacggcgacgcgctcgcgaccgtgcgcggcgtgcgctac
gtcgtgcaccgcggcccgctcgtcgatcgcggcgtcacgtcgggcagcgtgctgaccttc
caggaatcgcgcgcggtcgagcggctcgaccgtgcgctgcgctcgcagccgggcacccag
cagttcgcggcgcgctacacgctcgacgacgtggtcggcgcatccgcgccgatgacgcgc
gtgcgcgacctcgtgcgccgctacgcgaaatccgacgcgaccgtgctcgtgctcggcgag
agcggcaccggcaaggagatgatcgcgcagagcctgcatgcgctgtccgcgcggcgcagc
tatccgttcgtcgcgatcaactgcggcgcgtttccggaagcgctgctcgaaagcgagctg
ttcggctacgaggaaggcgcgttcaccggcgcgcggcgcggcggcaagacgggcctgttc
gaggccgcgcatcgcggcacgctgttcctcgacgagatcggcgagatgccgccgtcgctg
cagagccggctgctgcgcgtgctgcaggagcgcgaggtgatccggctcgggtcgaccgag
ccgatccgcatcgacgtgcgcgtgatcgccgcgacgcaccggccgctgctcgcggccgtc
gaggacggcacgttccgcgcggatctctactaccggctcaacatcctgaacgtcgggctg
ccgccgctgcgcgagcgcccggccgacattcccgcgctcgcggccgcgctgctggcgcag
gccgcgcggcgcgagccgcggctcgcggacagcctgcgcgatgccggcgacgcggcgcgc
gtgctcgacgcggcgcaggcgatcctgatgcgctaccgatggcccggcaacgtgcgggaa
ttgcagaacgtgatcgagcggatcgcggtggagctggcggaggaagcgggcgacgacggg
caggctgcgccgtgcggcgtgctcgatcccgacgcattgcaggcgatcgcgccggaactg
ttcgcgagcccggccgacgcgggtgccgatccggatgacgcgccgacgctgcaggcgcgc
cgccgccgcgcggaagccgacgagatccgcgcggcgctcgacgcatgcggcggcgatcgc
gaccgcgcgtgcgcgatgctcggcatcagcaagacgacgatgtggcgaaagctgtccggc
aggtag
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