Burkholderia ubonensis: BW23_4161
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Entry
BW23_4161 CDS
T03794
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bub
Burkholderia ubonensis
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bub03009
]
BW23_4161
Enzymes [BR:
bub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BW23_4161
Ribosome biogenesis [BR:
bub03009
]
Prokaryotic type
rRNA helicases
BW23_4161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
YjeF_N
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AJX13055
LinkDB
All DBs
Position
II:complement(983176..984570)
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AA seq
464 aa
AA seq
DB search
MSQPTATPFSTLPLTPATLANLAQLGYADMTPIQAASLPIALAGHDLIAQAKTGSGKTAA
FSLALLARLDARRFDVQAMVLCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQT
QSLEHGAHIVVGTPGRIMDHLDRGNLALDALNTLVLDEADRMLDMGFFDDIAKVARQCPP
TRQTLLFSATYPDGIAKLSQQFLRNPKEVKLAERHDDSKIRQRFYEVTEDERLHAVGLLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGGI
EQALKREVEWHPLAELKADANEPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFSGAQ
IGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaccgaccgccacgccgttcagcacgctgccgctgacgcccgccacgctcgcc
aatctcgcgcagctcggctatgccgacatgacgccgatccaggccgcgagcctgccgatc
gcgctggccggccacgacctgatcgcacaggcgaagaccggcagcggcaagaccgccgcg
ttctcgctcgcgctgctggcgcgcctcgacgcgcgccgcttcgacgtgcaggcgatggtg
ctgtgcccgacgcgcgagctcgccgaccaggtcgcgcaggaagtgcgccgcctcgcgcgc
gccgaggaaaacgtgaaggtgctgacgctgtgcggcggcacgccgatgcgcccgcagacg
cagagcctcgaacacggcgcgcacatcgtcgtcggcacgccgggccgcatcatggaccac
ctcgaccgcggcaacctcgcgctcgacgcgctgaacacgctggtgctcgacgaggcggac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcgcggcaatgcccgccg
acgcgccagacgctgctgttctccgccacgtacccggacggcatcgcgaagctgagccag
cagttcctgcgcaatccgaaggaagtgaagctcgcggagcggcacgacgacagcaagatc
cgccagcgcttctacgaagtgacggaagacgagcggctgcatgcggtcggcctgctgctg
aaccactatcgcccggtcagcacgatcgcgttctgcaacacgaagcagcaatgccgcgac
ctgctcgacgtgctgcacgcgcagggcttccacgcgctcgcgctgcacggcgagctcgag
cagcgcgagcgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtc
gcgaccgacgtcgccgcgcgcggcctcgacatcgcgcagctcgaggcggtaatcaacgtc
gacgtgacgcccgatcccgaagtgcacgtgcaccgcatcggccgcacgggccgcgcggac
caggacggctgggcgctgagcctcgcgagcatggacgagatggggcgcgtcggcggcatc
gagcaggcgctgaagcgcgaagtcgaatggcacccgctcgccgagctgaaggccgacgcc
aacgaaccgctgctgccgccgatggaaacgctgcagatcctcggcggccgcaaggacaag
atccgtcccggcgacgtgctgggcgcgctgacgggcgacgcgggcttcagcggcgcgcag
atcggcaagatcaacgtgaccgagttctcgacgtacgtcgcggtcgagcgcggcatcgcg
cgcgacgcgctgcgcaagctcaacgcgggcaagatcaagggcaagcgggtgaaggtccgg
ctgatggacgagtga
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