KEGG   Burkholderia ubonensis: BW23_456
Entry
BW23_456          CDS       T03794                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bub  Burkholderia ubonensis
Pathway
bub03030  DNA replication
bub03430  Mismatch repair
bub03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BW23_456 (dnaQ)
   03430 Mismatch repair
    BW23_456 (dnaQ)
   03440 Homologous recombination
    BW23_456 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bub03032]
    BW23_456 (dnaQ)
   03400 DNA repair and recombination proteins [BR:bub03400]
    BW23_456 (dnaQ)
Enzymes [BR:bub01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BW23_456 (dnaQ)
DNA replication proteins [BR:bub03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BW23_456 (dnaQ)
DNA repair and recombination proteins [BR:bub03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BW23_456 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AJX16149
LinkDB
Position
I:505483..506211
AA seq 242 aa
MRQIILDTETTGLNPRAGDRLIEIGCVELLNRRLTGNNLHFYVNPERDSDPGALAVHGLT
TEFLSDKPKFAEVVDQIRDFVKGAELIIHNAPFDLGFLDAEFARLDLPPFTEHCAGVIDT
LVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQDSLVIDML
DDDSADGGAANGQRVSLASLDLPVLAASDDELAAHQAQLDGLDKSVKGTCVWRRTPAAGD
AS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgccagatcattctcgataccgaaaccaccggcctgaacccccgcgcgggcgaccgc
ctcatcgaaatcggctgcgtcgagctgctgaaccggcggctcaccggcaacaacctgcac
ttctacgtgaaccccgagcgcgacagcgatccgggcgcgctggcggtgcacggcctcacg
accgaattcctcagcgacaagccgaagttcgcggaagtcgtcgaccagatccgcgacttc
gtcaagggcgccgagctgatcatccacaacgcgccgttcgacctcggctttctcgacgcc
gaattcgcgcggctcgacctgccgccgttcaccgagcattgcgcaggcgtgatcgacacc
ctcgtgcaggccaagcagatgttccccggcaagcgcaactcgctcgacgcgctgtgcgac
cgcttcggcatcagcaacgcgcaccggacgctgcacggcgccttgctcgactcggagctg
ctcgccgaggtgtacctcgcgatgacgcgcggccaggacagcctcgtcatcgacatgctc
gacgacgactcagccgacggcggcgcggcgaacggccagcgcgtgtcgctcgcgtcgctc
gacctgccggtgctggccgcgagcgacgacgaacttgccgcgcatcaggcccagctcgac
ggcctcgacaagtcggtcaagggcacctgcgtgtggcgccgcacgcctgcggccggcgac
gcgtcctga

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