Burkholderia ubonensis: BW23_4639
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Entry
BW23_4639 CDS
T03794
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03030
DNA replication
bub03410
Base excision repair
bub03420
Nucleotide excision repair
bub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BW23_4639 (polA)
03410 Base excision repair
BW23_4639 (polA)
03420 Nucleotide excision repair
BW23_4639 (polA)
03440 Homologous recombination
BW23_4639 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bub03032
]
BW23_4639 (polA)
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_4639 (polA)
Enzymes [BR:
bub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BW23_4639 (polA)
DNA replication proteins [BR:
bub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BW23_4639 (polA)
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BW23_4639 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BW23_4639 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AJX13660
LinkDB
All DBs
Position
II:1500777..1503530
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMKVVVSTGDKDLAQLVTDRVTLVNTMTNEILDRDGVTAKFGVPPERIV
DYLALIGDTVDNVPGVEKCGPKTAVKWLTQYDSLDGVIEHAGEIKGVVGDNLRRALDFLP
LGRKLVTVETACDLAPHLESIEATLATDGEARELLRDIFARYGFKTWLREIDIALEQSGD
ADALDGEPAPVVTAGAVREYDTIQTWAQFDAWFAKIDAAALTAFDTETTSLDPMVARLVG
LSFSVEPGKAAYLPVAHRGPDLPEQLPLDDVLARLKPWLESADRKKVGQHLKYDAQVLAN
YGIELNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
AQAAEYAAEDADITLQLHHALYPQVAREPGLERVYREIEMPVSIVLRKMERTGVLIDDAR
LQAQSTEIATRLIELEAQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPETGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHQIVSADYSQIELRIMAHISGDASLLRAFSNGE
DIHRATAAEVFGVTPLEVTTDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRAIAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDGLASRMIMQVHDELVLEVPEAELPRVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgatgacctctatgccgactat
aaggcaaaccgtccgtcgatgccgcccgatctcgcgctgcaggtcgagccgatccatggc
gccgtgcgcgcgctcggctggccgctgctgatggtcgagggcgtcgaagccgacgacgtt
atcggcacgctcgcgcgcgaagccgagcggcacgggatgaaggtggtcgtgtcgacgggc
gacaaggatctcgcgcagctcgtcaccgatcgcgtcacgctcgtcaacacgatgaccaac
gagatactcgaccgcgacggcgtgaccgcgaagttcggcgtgccgccggagcggatcgtc
gactatctggcgctgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaagtggctgacgcagtacgacagcctcgacggcgtgatcgagcac
gcgggcgagatcaagggcgtcgtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggacgcaagctcgtgaccgtcgagaccgcctgcgatctcgcgccgcacctcgaatcg
atcgaggcgacgctcgcgaccgacggcgaggcgcgcgagctgctgcgcgacatcttcgcg
cgctacggtttcaagacgtggctgcgcgagatcgacatcgcgctcgagcaaagcggcgac
gccgatgcgctggacggcgagccggcgccggtcgtgacggcgggcgccgtccgcgaatac
gacacgatccagacctgggcgcaattcgacgcatggttcgcgaagatcgacgcggccgcg
ctcaccgcgttcgacaccgagacgacgtcgctcgatccgatggttgcgcggctcgtcggc
ctgtcgttctcggtcgagcccggcaaggctgcctacttgccggtcgcgcaccgcggcccc
gacctgcccgagcaactgccgctcgacgacgtgcttgcacgcctgaagccgtggctcgaa
tcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgggatcgaactgaacggcatcgagcacgacacgctgctcgaatcgtacgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtatgaagacgtcgcgggcaagggcgcgaagcagatcggcttcgacgaagtcgcgctc
gcgcaggccgccgaatacgcggccgaagacgcggacatcacgctgcagctgcatcacgcg
ctgtacccgcaggtcgcgcgcgaaccgggcctcgagcgcgtgtaccgcgagatcgagatg
ccggtgtcgatcgtgctgcgcaagatggagcgcacgggcgtgctgatcgacgacgcgcgc
ctgcaggcgcagagcaccgaaattgcgacgcgcctcatcgagcttgaagcgcaggcgtac
gaactggccggcggcgaattcaatctcggttcgccgaagcagatcggccagatcttcttc
gagaagctgcagctgccggtcgtgaagaagacgccgagcggcgcgccgtcgaccgatgaa
gaggtgctgcagaagctcgcggaggattatccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctataccgacaagctgccgcggatggtcaacccggaa
acggggcgcgtgcacacgaactatgcgcaggctgtcgcggtcacgggccgcctcgcgtcg
aacgatcccaatcttcagaacattccggtgcgcaccgccgaaggccggcggattcgcgag
gcgttcatcgcgtcgccgggccaccagatcgtgtcggccgattattcgcagatcgaactg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgaacggcgag
gacatccaccgcgcgactgcggcggaagtgttcggcgtgacgccgctcgaagtgacgacc
gaccagcgccggatcgcgaaggtgatcaacttcgggctcatctacgggatgagctcgttc
gggctcgcgtcgaacctcggcatcacgcgcgatgcggcgaagctgtacatcgaccggtat
ttcgcgcgctacccgggcgtcgcgcaatacatggaggacacgcgcgcgatcgcgaaggag
aagggctacgtcgaaaccgttttcggccgccgtctgtggctgccggagatcaacggcggc
aatggtccacgccgccaggcggccgagcgcgcggcgatcaacgcgccgatgcagggcacc
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctcacgcgcgacggt
ctcgcgtcgcggatgatcatgcaggtgcacgacgaactggtgctcgaggtgcccgaggcc
gagctgccgcgcgtgcgcgagaaactgccggaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctcgtcgccgaggtcggcgccggcgcgaactgggaagaggcccactga
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