Burkholderia ubonensis: BW23_520
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Entry
BW23_520 CDS
T03794
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BW23_520 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_520 (recC)
Enzymes [BR:
bub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BW23_520 (recC)
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BW23_520 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJX17051
LinkDB
All DBs
Position
I:complement(569369..572707)
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AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLDDLAAFPARNAPWAPQQIIVPSAALRRRLELDIAERHGVCAN
VEFTYLAQWLWAQIGRVMTVPARSPFAPDRLVWRCYRLLAQASGDAPWLASPRLAGYLSA
SDDAMRYELAQRVATVLDHYLTYRPEWLAAWQAGESVLAGDGAPRGIGDAARDDERWQAA
LWRALLAELSDSGTPPAHRFLGDARHLDLDTVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRIYALNPCREFWFDIVTAAHAESLDAAGRLDYQEVGHPLLAEWGRQTQAQLHML
HELTESAASSDASRYVGNPAPTWLARIQNAILDLQPEAELGEPPAEHGIEVHVCHSLARQ
LEVLHDRLLAWFDADDSLRPSDVLVAVADLAAAGPLIDAVFGTSGAGSARIPYRISGLPP
SQANPVARVLLDWLALPERQVGAPELVEWLRVDAVAARYGIDAAALETVQTWLAAAGARR
GLAPQASDDALVPSPRHTFSDALARLFLGYAMPDGAAPVGGWLPIEAATGSEAELLGRLA
RFTDDLDGFARRVSEPHAPRAWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAMVE
GAPEQRLPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRIVCLLGMDDGVLP
SLARADEFDLMGVLPKLGDRQRRDDERNLFLDLVLGARDRLMIAYTGRSIRDNAPLPPAA
LVDELLDHLALVAAGPDAAPDAVDAARRAFLVEHPLQPFAAAYFRPDGPLFSYDAERASL
AALLAAEPSRDGARATAFFAQPLPAEPVEPVAFADFERFWRHPARALLRERLGIVLADAQ
AELLDTEPFALDYAGSDALAERVLPLLIESGDARARDHALRIADASPELPGGATGAVWRD
QALGSLTQLATNVRQALADGAERLPFSIEVAPAWPATEQALFGPFDAALSRDAAAAPLAL
HGTLNRVTAAGQVIFRYARPSARDYLSAWLAHLVYCAAMPDGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWAWVTDSEAKAASVWINDRVVSEADDPALAI
AWRGANPSLDEPFGTLARLVFEPLVEHLREAA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaaccgtcacgaaacgctggccgacgcgctgctcgacgac
ctggccgcgttcccggcgcgcaacgcgccgtgggcgcctcagcagatcatcgtgccgagc
gcggcgctgcgccgccgtctcgagctcgacatcgccgagcgccacggcgtgtgcgcgaac
gtcgagttcacctatctcgcgcagtggctgtgggcgcagatcggccgcgtgatgacggtg
ccggcgcgttcgccgttcgcgcccgaccgcctcgtgtggcgctgctaccggctgctcgcg
caggcgagcggcgatgcgccctggcttgcgtcgccgcggctcgccggatatctgtccgcg
tccgacgacgcgatgcgctacgagctcgcgcagcgcgtcgcgacggtgctcgatcactac
ctgacctatcgtcccgaatggctcgccgcgtggcaggcgggcgagtcggtgctcgcgggc
gacggcgcgccgcgcgggatcggcgacgcggcgcgcgacgacgagcgctggcaggcggcg
ctgtggcgcgcgctgctcgcggagctgagcgacagcggcacgccgcccgcgcaccgcttc
ctcggcgacgcgcggcatctcgatctcgacaccgtcgcgcgcgcggactggccggaatcg
gtcagcgtattcgcattgccgacgatgccgccgctgcacgtcgcgctgctgcgcgagctg
tcgcggtggatcgacgtgcgcatctacgcgctcaatccgtgccgcgaattctggttcgac
atcgtcaccgccgcgcacgccgagtcgctcgacgcggcggggcggctcgactaccaggaa
gtcgggcacccgctgctcgccgaatggggccgccagacgcaggcgcagctgcacatgctg
cacgagctgaccgaaagcgcggcgtcgagcgatgcgtcgcgctacgtcggcaatcccgcg
ccgacgtggcttgcgcggatccagaacgcgatcctcgacctgcagcccgaggcggagctc
ggcgagccgccggccgagcatggcatcgaggtgcacgtgtgccacagtctcgcgcgccag
ctcgaggtgctgcacgaccgcctgctcgcatggttcgacgcggacgacagcctgcggccg
tccgacgtgctggtcgcggtggccgatctcgccgcggcggggccgctgatcgacgcggtg
ttcggcacgtccggcgccggcagcgcgcgcatcccgtaccggatttccggcctgccgccg
tcgcaggcgaacccggtcgcgcgcgtgctgctcgactggctcgcgctgcccgaacggcag
gtcggcgcgccggagctggtcgaatggctgcgcgtcgatgcggtggccgcgcgctacggc
atcgacgcggccgcgctcgaaaccgtgcagacctggctggcggccgccggcgcgcgccgc
gggctcgcgccgcaagccagcgacgacgcgctggtgccgtcgccgcgccatacgttctcg
gacgcgctcgcacgcctctttctcggctacgcgatgccggacggcgcggcgccggtcggc
ggctggctgccgatcgaggccgcgaccggcagcgaggccgaactgctcggccgtctcgcg
cgcttcaccgacgatctcgacgggttcgcgcggcgagtgtcggagccgcacgcgccgcgc
gcgtggagcgagctgttcgccgatacgctcgcgcgcttcttcgattccggcgccgcttat
gccgacgcgctcgcgggcgtgcgcgacgcgctcgacgcgatgctcgcggcgatggtggag
ggcgcgcccgagcaacggctgcccgccgccgtcgtgcgcgcggggctggccgccgcgctc
gacgatcccgcccgcggcggggtgccgtggggcggcgtgacgttctcgtcgctgacgagc
ctgcgcgggctgccgtaccggatcgtgtgcctgctcgggatggacgacggcgtgttgccg
agcctcgcgcgcgcggacgagttcgacctgatgggggtgctgccgaagctcggcgaccgg
cagcggcgcgacgacgagcgcaacctgttcctcgacctggtgctcggcgcgcgcgaccgg
ctgatgatcgcctacacggggcgcagcatccgcgacaacgcgccgttgccgccggccgcg
ctcgtcgacgagctgctcgaccatctcgcgctcgtcgcggccggtcccgacgccgcgccg
gacgcggtcgacgccgcgcgtcgcgcattcctcgtcgagcatccgctgcagccgttcgcc
gccgcgtatttccggccggacggcccgctgttttcctatgacgcggaacgggcgtcgctc
gccgcgctgctggccgccgagccgtcgcgcgacggcgcgcgcgccacggcgttctttgcg
cagccgctgccggccgagcccgtcgagccggtcgcgttcgcggacttcgagcgcttctgg
cgtcacccggcgcgcgcgctgctgcgcgagcgcctcggcatcgtgctcgcggacgcgcag
gccgaactgctcgacaccgagccgttcgcgctcgactacgcgggcagcgacgcgctcgcc
gagcgcgtgctgccgctcctgatcgaatcgggcgacgcgcgcgcgcgcgaccatgcgctg
cggatcgcggacgcgagcccggagctgccgggcggcgcgaccggggccgtgtggcgtgac
caggcgctcggctcgctgacgcaactggcgacgaacgtgcggcaggcgctcgccgacggc
gccgaacgcctgccgttctcgatcgaggtcgcgccggcgtggcccgcaacggagcaggcg
ctgttcggcccgttcgacgcggcgctgtcgcgcgacgcggcggccgcgccgctcgcgctg
cacggcacgctgaatcgcgtgacggccgcggggcaggtcatcttccgctatgcgcggccg
agcgcgcgggactacctgtccgcgtggctcgcgcatctcgtctattgcgcggccatgccg
gacgggccgcgccgcacgctgtggttcggcagcggcggcgcattcgagctgacgcccgtc
gcggcgccgctcgagcgcctcgcgccgctcgccgcgctgttcagggccggccggcgcatg
ccgctgcgcttctttccgcgcagcgcgtgggcctgggtgaccgatagcgaagcgaaggcg
gcaagcgtgtggatcaacgaccgggtcgtgagcgaagccgacgatcccgcgctcgcgatc
gcgtggcgcggcgcgaatccgtcgctcgacgagccgttcggcacgctcgcgcggctcgtg
ttcgagccgctcgtcgaacacctgagggaggcggcatga
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