Burkholderia ubonensis: BW23_6050
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Entry
BW23_6050 CDS
T03794
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
bub
Burkholderia ubonensis
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Paralog
GFIT
Motif
Pfam:
Autotransporter
AC_1
PATR
Motif
Other DBs
NCBI-ProteinID:
AJX14532
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Position
III:542623..545781
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AA seq
1052 aa
AA seq
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MIRSIASSQWFRKKSIAAAVLLLASPLVRAQAVSVTGGSTVTVDGIISTTSNFVSGYGLF
VTNGGTATGSADISTAGSNAQAVYVSYGGNVKLSDSSVATTGSQSPAVHALFGNAMAALD
NTAVTTSGNWSHGIEASDNSTIMLQDGSVTTSGQNAYGLYAIGTGSNLTATGTTVSTSGN
NSIGAYNQGGGLITLDDVSIVTAGSNARGVQIGAQGVVGNSTTENVIQISNSTVTTTGDN
STGLLASDNATLNAANVGVLTSGASSFGAAALFGAQMQLKGGSVSTSGDDAWGLVVAGMP
ATSGDVGTTAPSITASGLTISTSGQNAPAAYVAGGTNLSVADSTLKATGAGSDVVYGAAY
DTMAAASASFADSTLESAQANGLHASGAALSVSLDNSTVTAGNHAMIADSGATLNVVADG
STLTGTADVDSASTLDATLQNSSIWNVKGASNVSSLTLDNGTVRYLGPAQLNAGGVTLGA
NGGIFDTGEFDAALNAAIAGTGSLRKTGTGTLTLSGENTYSGNTTVSTGTLQAGSTGAFS
AMSGFTVAGGAMLDLNGFSQTVAGVSNSGTVHFGTTAGTTLTVTGDYAGNDGRLVMNTVL
GDSSSVTDLLHVQGSTSGNTGVQIVNAQGLGALTTGNGIKVIQVDGISGGTFTQSAQIEA
GAYVYTLYKGGTGSNATNGNWYLRSTLESQSSSSEASTADDSSSTDHSGSVPAGDNLTTQ
DAPAIQSAPIAYRPGTVGYVMTPQLNANLGFSMLGTLHRRVGDVPGAAAPQNAGADGVWG
RIEGQTLQADAISRFSADSRSMFVQFGKDWTFARDAAGGSTHAGVTLNFGSASADFSDRM
RSIVGLGTATGTVETQTQGFGGYWTRYFTDGAYSDSVIQFNHYHNRYGDITGNTAGQNGF
GVAVSEELGKAFQVPRLPVAFEPQIQLAYQYLNLKGFNDNVSAISGTTTHALRGRIGFRL
LRSDMENATKSSALTPYFTANLLRDFISPGQTVVGGTPIDTTLSRTWLDVGLGFTVSYGK
HGNLYASARYEHNVGGERRRGVSGNMGVRYMW
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgattcgaagtattgcgtcatctcaatggtttcggaagaagagtatcgcggcagccgtt
ctgttgctcgcgtcgcccctggttcgcgctcaggccgtttccgttaccggcggctcgact
gtcacggtcgacggcatcatctcgacgaccagcaacttcgtaagcggatatggccttttc
gtgaccaacggcggcaccgcaaccggttcggccgacatttcgacggcgggtagcaatgcg
caggccgtttatgtttcatatggcggcaacgttaagctcagtgacagttcggtggcgacc
accggatcgcaatcgccggccgtccatgcgctgttcggcaatgcgatggcggcactcgac
aataccgcggtaacgacctcgggaaactggtcgcacggcatagaggcaagcgacaacagt
acgatcatgttgcaagacggctcggtcaccacttccggacaaaacgcatacggcttgtat
gccatcggcacggggtcgaacctgaccgcaaccggcaccaccgtttctacctcgggcaac
aacagcatcggcgcatacaatcagggaggcgggttaatcacgctcgacgacgtgtcgatc
gtcaccgcgggcagcaatgcgcggggcgtccagatcggtgcgcaaggcgtggtcggcaac
agcacgaccgagaacgtcatccagatttcgaacagcacggtcaccacgaccggcgacaat
tcgaccggtctgctcgcgtcggacaacgccacgctgaacgcagcgaacgtcggggtgctt
acgtcgggcgccagcagtttcggtgcagccgcgctgtttggcgcacagatgcagctgaaa
ggcggttccgtctcgacgtccggcgatgatgcatgggggctcgtggtcgccggcatgccg
gcgacgtccggcgacgtcggcacgaccgcgccgtccattaccgcgtcgggcctgacgatc
agcacttcggggcagaatgcgccggctgcctatgtcgcgggcggcaccaacctgtcggtg
gcggacagcacgctgaaggcgaccggcgcgggttctgacgtcgtctacggcgcggcgtac
gacacgatggccgccgcctcggccagctttgccgacagcacactggaatcggcgcaggcc
aacggcctgcatgcgagcggcgcggcgctgtccgtgagcctcgacaactcgacggtcacg
gcgggcaaccatgcgatgatcgccgacagcggcgctacgctgaacgtcgtggccgatggg
tccaccctgaccggtaccgccgacgtggattccgcctcaaccctggatgccacgctgcaa
aacagctcgatatggaatgtgaagggggcgtcgaacgtcagttcgttgacgctcgacaac
ggcaccgtgcgctatcttgggccggcgcagctcaatgcaggcggcgtgacgctgggcgcc
aacggcggcatcttcgataccggcgaattcgatgcggcgctgaacgccgcgatcgccggc
accggctcgctacgaaaaaccggcaccggcaccctgacgctttcgggcgagaatacgtat
tcgggcaacaccacggtcagcaccggcaccttgcaggcgggctcaaccggggcgttcagc
gcgatgtcgggcttcaccgtcgccggcggcgccatgctcgatctgaacgggttcagccag
accgttgcaggcgtgagcaatagtggcaccgtccacttcggcacgacggcgggaaccacg
ctcaccgtgaccggggattacgcaggcaatgacggccggctggtgatgaatacggtgctc
ggcgactcttcatcggtcaccgacctgctgcatgtgcagggctccacctcgggcaatacc
ggcgtgcagatcgtcaacgcgcaagggctcggtgcgctcaccacaggcaacggcatcaag
gtgattcaggtcgacggcatatccggcggcacgttcacgcagtccgcgcagatcgaggca
ggcgcctacgtctacacgctgtacaaaggcggcacgggtagcaacgcaaccaatggcaac
tggtatctgcgctcgacgctggaaagccagtcttcgtcatccgaagcatccacggcagac
gattcgtcctcgaccgaccattccgggtcagtgccggccggcgacaacctcaccactcaa
gatgcgccggccattcagtcagccccgatcgcctatcgccccggcacggtcggctacgtg
atgacgccgcagctgaatgccaatctgggcttttccatgctgggcacgcttcatcggcga
gtaggcgacgttccgggcgcggccgcgccgcaaaatgcgggtgccgatggcgtatggggc
cgtatcgaaggacagacgttgcaggcggacgcgatctcgcgcttttcggcagacagccga
agcatgttcgtgcaattcggcaaggactggacattcgcgcgcgatgcggcagggggcagc
acccatgcaggcgtcacgctgaacttcggttccgcatcggcggacttctccgatcgaatg
cgcagcatcgtgggactcggcacggcaaccggcacggtcgaaacgcaaacgcaaggtttc
ggcggctattggacccggtatttcacggatggcgcttattccgacagcgtcattcaattc
aatcactaccacaatcggtatggcgatatcaccggtaatacggcgggccagaacgggttt
ggcgtagcggtatccgaagagcttggcaaagcctttcaggtaccgcggttgccggtcgct
ttcgaaccgcagattcaactcgcttatcaatacctgaacctgaagggcttcaatgacaac
gtgtccgccatttcgggcaccacgacccatgcgctgcgcggacgcatcggtttccgtctg
ctgcgctccgacatggaaaacgcgacgaaatccagcgcgctaacgccgtacttcaccgcc
aacctgctgcgcgattttatctcgccgggccaaaccgttgtgggcgggacgccgatcgac
accacgctgtcacgtacttggctcgacgtcgggctcggcttcaccgtgagctacggaaaa
cacggcaacctgtatgcttccgctcgctatgagcataacgtcggcggtgagcgccgccga
ggcgtaagcgggaatatgggtgtccgctatatgtggtga
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