Burkholderia ubonensis: BW23_730
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Entry
BW23_730 CDS
T03794
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bub
Burkholderia ubonensis
Pathway
bub03030
DNA replication
bub03430
Mismatch repair
bub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BW23_730
03430 Mismatch repair
BW23_730
03440 Homologous recombination
BW23_730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bub03032
]
BW23_730
03400 DNA repair and recombination proteins [BR:
bub03400
]
BW23_730
Enzymes [BR:
bub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BW23_730
DNA replication proteins [BR:
bub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BW23_730
DNA repair and recombination proteins [BR:
bub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BW23_730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
AJX17374
LinkDB
All DBs
Position
I:complement(800913..802040)
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AA seq
375 aa
AA seq
DB search
MSDSRLTDPACEQPLVFVDLETTGGSSAEHRITEIGVVEIGPLGVSTWTSLVNPGQPIPP
FIQQLTGISDAMVRDAPSFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERIGLAFNP
DVLCTVRLSRALFPRESRHGLDALIQRHGLVPSARHRALADADLLWQFWRHLHETVPLER
LRDQITRTTRHFRLAGGLTEAWLDTAPAGCGAYALFGEADEPLYVGRSVRVRQRLRALLT
GERRSSKELRLAQQVRRVEWRETGNELGAMLAEAQWVARLRPTFNRRPADAARAGAAAPW
PFDGAVAFEAHGERRLFHVIEGWRYLGAVETLDAAARLAVDEAAGTFEPFTYRLLQTHLA
RGLQLIPLAAFAPAG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccgtttgaccgatcccgcctgcgagcaaccgctcgtcttcgtcgacctc
gaaaccaccggcggctcgtccgccgagcaccgcatcaccgaaatcggcgtggtcgaaatc
ggcccgctcggcgtgtcgacgtggacctcgctcgtcaatcccgggcagccgattcctccg
ttcattcagcaactgaccggtatttcggatgcgatggtgcgcgatgcgccgtcgttcgcc
tcgctcgcgcccgcgctgttcgagcggctcgacggcaagctgttcgtcgcgcacaacgcc
agcttcgaccgcggattccttcgcgccgagttcgagcgcatcgggttggcattcaatccg
gacgtgctgtgcaccgtgcgcttgtcgcgcgcgctgtttccgcgcgaatcgcggcacggg
ctcgacgcgctgatccagcggcacggactcgtgccgtccgcgcggcaccgggcgctcgcg
gatgccgacctgctgtggcagttctggcgtcacctgcatgagaccgtgccgcttgagcgg
ttacgcgaccagatcacccgcacgacccgccatttccgtctggcgggcggactgaccgag
gcgtggctcgacaccgcgccggcgggatgcggcgcctatgcgttgttcggcgaagcggac
gaaccgctctatgtcgggcgcagcgtgcgggtgcggcagcggctgcgcgcactgctgacc
ggcgagcggcgctcgtcgaaggaactgcggctcgcccagcaggtgcggcgcgtcgagtgg
cgggagaccggtaacgaactcggcgcgatgctcgccgaagcgcagtgggttgcgcggttg
cgtccgacattcaatcgtcgtccggcagacgcggcgcgcgcgggtgcggcggcgccgtgg
ccgttcgacggggcggtcgcgttcgaggcgcacggcgagcgccggctgttccacgtgatc
gaaggctggcgctacctcggcgcggtggagacgctcgacgcagccgcgcggctggccgtc
gacgaagcggccgggacgttcgagccctttacctatcgtctgctgcagacgcacctcgcg
cgcggcctgcagttgattccactggccgcattcgcgcctgcgggttag
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