Burkholderia ubonensis: BW23_935
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Entry
BW23_935 CDS
T03794
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bub
Burkholderia ubonensis
Pathway
bub00260
Glycine, serine and threonine metabolism
bub00460
Cyanoamino acid metabolism
bub00630
Glyoxylate and dicarboxylate metabolism
bub00670
One carbon pool by folate
bub00680
Methane metabolism
bub01100
Metabolic pathways
bub01110
Biosynthesis of secondary metabolites
bub01120
Microbial metabolism in diverse environments
bub01200
Carbon metabolism
bub01230
Biosynthesis of amino acids
bub01240
Biosynthesis of cofactors
bub04981
Folate transport and metabolism
Module
bub_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BW23_935
09102 Energy metabolism
00680 Methane metabolism
BW23_935
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BW23_935
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BW23_935
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BW23_935
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BW23_935
Enzymes [BR:
bub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BW23_935
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AJX18178
LinkDB
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Position
I:complement(1006424..1007671)
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AA seq
415 aa
AA seq
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MFDRAQSTIANVDPEVFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKELFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNESEDIDYEAAEQLAQEHKPKLIVAGASAFAL
KIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGTAEAELVGNLIADVLDNPEDAATIERVRAQVADLTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccattgcgaacgtcgatcccgaagtctttgcagcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcgcagggctcgcagctcacgaacaagtacgccgaaggctac
ccgggcaagcgctactacggcggctgcgaatacgtcgacgtcgtcgagcagctcgcgatc
gaccgcgtgaaggaactgttcggcgccgaagccgcgaacgtccagccgaactcgggctcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgcccgtgaacatgtcgggcaagtgg
ttcaacgtcgtcagctacggcctgaacgaaagcgaagacatcgactacgaagcggccgag
cagcttgcgcaggagcacaagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctg
aagatcgacttcgagcgtctcgcgaagatcgcgaagtcggtcggcgcgtacctgatggtc
gacatggcgcactacgcaggcctgatcgccgcgggcgtctacccgaacccggtgccgcac
gccgatttcgtcacgaccacgacccacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagcagatcaactcggcgatcttcccgggcatccagggt
ggcccgctgatgcatgtgatcgctgcgaaggcggtcgcgttcaaggaagcgctgtcgccg
gagttcaaggcgtaccagcagaaggtggtcgagaacgcgcgcgtgctggccgagacgctg
gtcaagcgcggcctgcgcatcgtgtcgggccgcaccgaaagccacgtgatgctggtcgac
ctgcgtgcgaagcacatcacgggcaaggcggcggaagccgcgctcggcgccgcgcacatc
acggtcaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggtgtc
cgtctcggctcgccggcgatgacgacgcgcggcttcggcacggccgaagcggagctggtc
ggcaacctgatcgccgacgtgctcgacaacccggaagatgcagcgacgatcgagcgcgtg
cgcgcgcaagtggccgacctgaccaagcgtttcccggtctatcgctga
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