Buchnera aphidicola APS (Acyrthosiphon pisum): BU284
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Entry
BU284 CDS
T00036
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
buc
Buchnera aphidicola APS (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
buc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buc03032
]
BU284 (topA)
03400 DNA repair and recombination proteins [BR:
buc03400
]
BU284 (topA)
Enzymes [BR:
buc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BU284 (topA)
DNA replication proteins [BR:
buc03032
]
Prokaryotic type
DNA Topoisomerases
BU284 (topA)
DNA repair and recombination proteins [BR:
buc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BU284 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Toprim
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAB12994
UniProt:
P57371
LinkDB
All DBs
Position
309445..312030
Genome browser
AA seq
861 aa
AA seq
DB search
MQKSLVIVESPAKAKTINQYLGSEYIVKSSIGHIRDLTKGKLYNKEKNKKFLNENFIEKT
NENKILIKQMGIDPYQNWKFEYHILPGKEKIISELKYIANQVKHIYLATDLDREGEAIAW
HLKEVIGGDSSKFSRVVFNEITQHSIQKAFKNVGHINMNRVHAQQARRFMDRIVGYMISP
LLWKKIARGLSAGRVQSVAVRIIADRESIIKNFVPEEYWKLDVSLISQDKKKINMDVTHY
NNKKFRPINENEVSFAVEKIQKSSCIVKNYEEKISYLKAPAPFITSTLQQSASLRLGFSV
KKTMFLAQKLYEEGYITYMRTDSNYLSEYAIKKVRKYIKSNYGSNYLPKEPNIYSNEKHS
QEAHEAIRPSDIKIKNIDSDHLNSSAKKLYELIWNQFLASQMKSVKYKSITVTVLADMFK
LQKSERIVMFQGWNKVLIEEKNVFSQFPILQTGSQLFINKVTPSQKFTKPPPRFSEASLV
RELEKKGIGRPSTYSAITSKIQDRGYVKIKKNKFYAEKMGEILTIRLKKSFSNLIDYNFT
AHMEKKLDQVAENKVTWRYLLDDFFKKFSEQLEQAKKSPEEGGMELNNIVPTSLNCPICC
KKMGIKTAITGVFLSCLGYNNTDNKKRCKKTINLITLNDFNKEQDNQKKISLQLIQKCDI
CNMYMDSYFINEKLKLHICANNPSCSGYKFEKGVFKSPIYLSKTIQCEKCYNNMKLKIGP
FGKFFTCINKICKNTRKILPNGEISDPKLEPIPFPELLCKQSDAWFVLREGISGIFFAAN
TFPKSRETRSPFVEELVRFQHLLPEKIYYLSSAPVIDNYGNKTIVCFDKKKKTHYIASKK
DGKFTGWSAVFIDQKWCVINK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatctctggtaatagtcgaatctccagcaaaagcaaaaactataaatcaatat
ttaggttctgaatacatagttaaatctagcatcggacacatccgagatttaacgaaagga
aaactatataacaaagaaaaaaacaaaaaatttttaaatgaaaatttcattgaaaagact
aatgagaataaaattttaattaaacaaatgggaattgatccttatcaaaattggaaattt
gaatatcatattttacctggcaaagaaaaaataatttctgaattgaaatatatcgcaaat
caagttaaacatatatatcttgctacagatttagatagagaaggagaagctatagcttgg
catttaaaggaagttattgggggagattcttctaaatttagtcgtgtagtatttaatgaa
atcacacaacattccatacaaaaagcttttaaaaatgtaggtcatataaatatgaatcga
gtgcatgcgcaacaagcacgtcggtttatggatagaattgtaggttatatgatttcacct
ttattgtggaaaaaaattgcaagaggcttatctgcaggacgagttcaatctgtagccgtt
cgtataatagcagatcgtgaaagtattataaaaaactttgttcctgaagaatattggaaa
ttagatgtgtctcttatttctcaagataaaaaaaagattaatatggatgtcacacactat
aataataaaaaatttcgtccgataaatgagaatgaagtatcttttgcagttgaaaaaatt
caaaaatcatcttgcattgtgaaaaattacgaagaaaaaatatcttatctaaaagcacct
gctccatttataacatctactttgcagcaatctgccagtcttcgtttaggatttagcgta
aaaaaaacaatgtttttagcgcaaaaattatatgaagaaggctatataacttatatgaga
actgattccaattatttaagtgaatatgctattaaaaaagtacgaaaatatataaaaagt
aattatggctctaattacttacctaaagaaccaaatatatattccaatgaaaaacattct
caagaggctcatgaggctattcggccttctgatatcaaaataaaaaatatagattcagat
catttgaactctagtgctaaaaaattatatgaattaatttggaatcaatttttagcttct
caaatgaaatcagttaaatacaaatctataaccgtaacagttttagctgatatgtttaaa
ttacaaaaaagtgaacgaattgtaatgtttcagggttggaataaagttttaattgaagaa
aaaaatgttttttctcaatttccaatacttcaaacaggaagtcagttatttattaataaa
gttacacctagtcaaaagttcactaaacctccaccacgttttagcgaagcgtctttagtt
cgcgaattagaaaaaaagggtattggaagaccttctacctattctgctattacatcaaaa
atacaagatcgaggatatgttaaaattaaaaaaaacaaattttacgcagaaaaaatggga
gaaattcttactattcgattaaaaaaaagtttcagcaatttaattgattataattttacc
gcacatatggaaaaaaaacttgatcaagttgcggaaaataaagttacatggagatatttg
cttgatgatttttttaaaaagttttctgagcaactagaacaggctaaaaaaagcccagaa
gaaggaggaatggaattaaataatattgttccaacttcacttaattgtccaatatgttgc
aaaaaaatgggtataaaaactgcaataactggtgtttttcttagttgtttgggatataac
aatactgacaataaaaaacgttgcaaaaaaactattaatcttattacattaaatgatttt
aataaagaacaagataatcaaaaaaaaatatctctacaattaattcaaaaatgtgacata
tgtaatatgtatatggatagttattttattaatgaaaaactaaagttgcatatttgtgcg
aataatcccagttgttctggctataaatttgaaaaaggagtttttaaaagtcctatttat
ttatctaaaacaattcaatgtgaaaaatgttataataatatgaaattaaaaataggtcca
tttggtaaattttttacatgtataaacaaaatatgtaaaaacacaagaaaaattttacct
aatggcgaaatatctgatccaaaattagaaccgattccttttccagaattattatgcaaa
caatctgacgcatggtttgttttacgggaaggcatttctggtattttttttgcagcaaat
acttttcctaaatcacgtgaaactagatctccatttgtagaagaattagtccgttttcaa
catttattaccagaaaaaatatattatttatctagtgcacctgttattgataattatgga
aataaaactattgtttgttttgataaaaaaaagaaaacgcattacattgcttctaaaaaa
gacggaaaatttacaggttggtcagctgtatttattgatcaaaaatggtgtgtaataaat
aaatga
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