Burkholderia humptydooensis MSMB43: AQ610_01735
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Entry
AQ610_01735 CDS
T04266
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud00300
Lysine biosynthesis
bud00470
D-Amino acid metabolism
bud01100
Metabolic pathways
bud01110
Biosynthesis of secondary metabolites
bud01120
Microbial metabolism in diverse environments
bud01230
Biosynthesis of amino acids
Module
bud_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AQ610_01735
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AQ610_01735
Enzymes [BR:
bud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AQ610_01735
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
Motif
Other DBs
NCBI-ProteinID:
ALX41266
LinkDB
All DBs
Position
1:complement(363136..364407)
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AA seq
423 aa
AA seq
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MTQAAFDYVDGTLHAERVSAADLAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVA
VKANSNLGVLNVFARLGAGFDIVSGGELARVLAAGGRAQNVVFSGVGKNADEMRIALEAG
VKCFNVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDA
RATYRAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVEQIEADGVKIGHVDVGG
GLGITYDDETPPDIGAYVRAVLERIDARGHGHREIWFEPGRSLTGNAGILLTRVEFLKQG
EEKNFAIVDAAMNDLARPAMYQAFHAIEPVTPRMDVAAAVYDVVGPVCESGDWLGRGRSL
AIAPGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEREAVLP
DGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagctgcattcgactacgtcgacggcacgctccacgccgagcgcgtgtccgcc
gccgacctcgccgagcgtttcggcaccccgctcttcgtctattcgcgcgccgcgctcacc
gcggcctacgaggcctacgcgaaggcctgcgccggccgccgcgcgtcgattcacgtcgcc
gtgaaggcgaacagcaacctcggcgtgctgaacgtgttcgcgcgcctcggcgcgggcttc
gacatcgtgtcgggcggcgagctcgcacgcgtgctcgcggcaggcggccgtgcgcagaac
gtcgtgttctcgggcgtcggcaagaacgccgacgaaatgcgcatcgcgctcgaagcaggc
gtcaagtgcttcaacgtcgaatcgattccggagctcgaccggctgaacgccgtcgcggcg
tcgctcggcaagcgcgcgcccgtgtcgctgcgggtgaatccggacgtcgatccgaaaacg
cacccttacatctcgacggggctgaaggcgaacaagttcggcatcgcgttcgatgacgcg
cgcgcgacgtaccgcgcggcggccgcgctgccgaacctcgaagtcgtcggcatcgattgc
cacattggctcgcagatcaccgagctgagcccgtacctcgacgcgatcgacaagctgctc
gacctcgtcgagcagatcgaggcggacggcgtgaagatcggtcacgtcgacgtcggcggc
gggctcggcatcacgtacgacgacgaaacgccgcccgacatcggcgcttacgtgcgcgcg
gtgctcgagcgcatcgacgcgcgcggccacggccatcgcgaaatctggttcgagccgggc
cgctcgctgacgggcaacgccggcattctgctcacgcgcgtcgaattcctgaagcagggc
gaagagaagaacttcgcgatcgtcgacgcggcgatgaacgaccttgcgcgccccgcgatg
taccaggcgtttcacgcgatcgagccggtgacgccgcgcatggacgtcgcggccgccgtg
tacgacgtcgtcggccccgtctgcgagagcggcgactggctcgggcgcgggcgctcgctc
gcgatcgcgccgggcgatctgctcgcgatccgctcggcgggcgcgtacggcttcacgatg
agctcgaactacaatacgcggccgcgcgcggcggaagtgatcgtcgacggcgcgaacgcg
catctggtgcgaccgcgcgagacggtcgaaagcctgttcgaacgcgaagcggtcctgccc
gacggccggtaa
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