Burkholderia humptydooensis MSMB43: AQ610_08395
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Entry
AQ610_08395 CDS
T04266
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud03030
DNA replication
bud03430
Mismatch repair
bud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQ610_08395
03430 Mismatch repair
AQ610_08395
03440 Homologous recombination
AQ610_08395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bud03032
]
AQ610_08395
03400 DNA repair and recombination proteins [BR:
bud03400
]
AQ610_08395
Enzymes [BR:
bud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQ610_08395
DNA replication proteins [BR:
bud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AQ610_08395
DNA repair and recombination proteins [BR:
bud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AQ610_08395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_14
AAA_22
AAA_16
AAA_5
DUF3646
AAA_18
TsaE
Mg_chelatase
AAA_2
AAA_assoc_2
Com_YlbF
Glyco_tranf_2_5
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALX42434
LinkDB
All DBs
Position
1:1828809..1831304
Genome browser
AA seq
831 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGM
LGTLDQTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPA
SVLDEWPEAADLRRFSELLSPEQVQLYYQIATLGRGELGLAPDEYAGFTMTLLRMLAFEP
ATTGGGATGGGLPAQAAGAAPKSGARATAAVGAAAPAVAAAAQTPRAAGARAATRAETPS
PAQAAPATAERGGDASANARVPADARPGEHERDARPHAGAPRADLSASSGTQSDAASESA
PRAAESSESTPAAVSAAPAVPESATPVAASSTEAATEASTEEVAAAPAPVAAESRAPAPA
SAAGAPAPRATGAAAALDVLRNAGMRVSSDRGRGADAARPAAPATASAAKSAPRVQVPVP
TPRARASAGDAPPDGTARAEARSGSRNAPPPWEDIPPDDYVPLSMDDGFIPPDDGFVPVF
DGGPDDVRVAPKPAPAPPVDARPLPEPIPLDAIGYDGEWPTLAASLPLKGVAYQLAFNSE
LTSAGGGALKLAVPVPQYADAAQVAKLKAALADALGKPVDVTVEVGPARRTAAAIAAAER
AKRQREAEQEMSADPFVQQLLREFGASIVEGSIRPVGPETGAADGAAPTLH
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtttgcatcacgcc
tatttattcacgggcacgcgcggcgtcggcaagacgacgctgtcgcgcatcttcgcgaag
gcgctcaattgcgagacgggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgtcgc
gagatcgatgaagggcgcttcgtcgactacgtcgaaatggacgcggcgagcaatcgcggc
gtcgacgaaatggccgcgctgctcgagcgcgcggtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccacgcgttcaacgcgatgctg
aaaacgctcgaagagccgccgccgcacgtcaagttcatcctcgcgacgaccgacccgcaa
aagattcccgtcaccgtgctgtcgcgctgcctgcagttcaatctgaagcagatgccggcc
gggcacatcgtgtcgcacctcgagcggattctcggcgaggagcggatcgcgttcgagccg
caggcgctgcgtcttctcgcgcgcgcggcgcagggcagcatgcgcgatgcgctgtcgctg
accgatcaggcgatcgcgtattcggcgaacgaagtgaccgaaaccgctgtatccggcatg
ctcggcacgctcgaccagacctacatggtgcggctactcgacgcgctcgccgccgccgac
ggtccgcagattctcgccgtcgccgacgagatggcgctgcgcagcctgtcgttctcggcc
gcgctgcaggatctcgcgagcctgctgcaccggatcgcgtgggcgcagttcgcacccgcg
tcggtgctcgacgaatggccggaagcggccgatctgcgccgcttctccgagctgctgagc
ccggagcaggtgcagctctattatcagatcgcgacgctcgggcgcggcgagctcggcctc
gcgcccgacgaatacgcgggcttcacgatgacgctgctgcgaatgctggcgttcgagccg
gcgacgacgggcggcggcgcgacgggcggcgggttgcccgctcaggcggccggcgccgcg
ccgaagtcgggcgcgcgcgcgactgctgccgtcggcgcggcggcgcccgcagttgctgcg
gcggcgcaaacgccaagggcggccggcgcgcgtgcggcaacgcgcgccgagacgccgtcg
cccgcgcaagcggcgccggcgacggccgagcggggcggagacgcgtccgcgaacgcgcgc
gtgccggccgacgcacgccccggcgagcacgagcgcgacgcgcggccgcatgccggcgcg
ccgcgcgccgacttgagcgcatcatcgggcacgcagtcggacgctgcgtccgaatccgcg
ccgcgcgcggccgagtcgtccgaatcgacgcccgctgccgtgtccgcagcgcccgccgta
cccgagtcggccacgccggtcgccgcgtcatcgactgaggcagcgaccgaggcctcgact
gaggaagtcgccgcggcgcccgcgcccgtcgcggccgaatcccgagcgccggcacccgca
tccgctgccggcgcacccgcgccgcgcgcgactggcgcggccgccgcgctcgacgtgctg
cgcaatgcgggcatgcgcgtgtcgtccgatcgtggccgcggcgcagacgccgcgcgcccg
gccgcgccggccacggcgtccgccgcgaagtccgcgccgcgcgtgcaggtgcccgtgccg
acgccgcgcgcccgcgcgtcggccggcgatgcgccgccggacggcaccgcgcgcgccgaa
gcgagatccgggtctcgcaacgcgccgccgccgtgggaggacataccgcccgacgattac
gtgccgttgtcgatggacgacgggttcatcccgcccgacgacggtttcgtcccggtgttc
gacggcggccccgacgacgtccgcgtcgcgccgaagccggcacccgcgccgcccgtcgac
gcgcgtccgctgccggagccgattccgctcgacgcaatcggctacgacggcgaatggccg
acgctcgcggcgagcctgccgctcaagggcgttgcttaccagctcgcgttcaacagcgaa
ctgacgtcggccggcggcggcgcgctcaagcttgccgtgccggtgccgcaatacgcggac
gccgcgcaggtcgcgaagctgaaggcggcgcttgcggatgcgctcggcaagccggtcgac
gtcacggtcgaggtcgggccggcgcgccgcaccgcggcggcgatcgctgccgccgagcgc
gcgaagcggcagcgcgaggccgagcaggagatgagcgccgatccgttcgtccagcagttg
ctgcgcgaattcggcgcgagcatcgtcgaaggctcgattcggcccgtcggcccggaaacg
ggcgccgcggacggcgccgcgccgacgctgcattga
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