Burkholderia humptydooensis MSMB43: AQ610_08610
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Entry
AQ610_08610 CDS
T04266
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bud
Burkholderia humptydooensis MSMB43
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bud03009
]
AQ610_08610 (rimO)
Enzymes [BR:
bud01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AQ610_08610 (rimO)
Ribosome biogenesis [BR:
bud03009
]
Prokaryotic type
ribosomal protein modification factors
AQ610_08610 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
DUF2249
S1CSD-TOTE-1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALX42472
LinkDB
All DBs
Position
1:1876674..1878011
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AA seq
445 aa
AA seq
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MVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEAL
AENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHAVGEVMQVVHSHLPKPHDPFVD
LVPAAGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVAEVMLEAENLFKSGVK
ELLVISQDTSAYGVDVKYRTGFWNGRPLRTRMTELVGALGELAAQYGAWVRLHYVYPYPH
VDEIIPMMAQGPLKDHVLPYLDVPFQHAHPDVLKRMKRPANAERVLERVQKWREICPDLT
IRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEGASANELDGALPDDMREAR
RARFMEVAEEVSAARIERKVGKTLKVLIDEVNEEGGVGRTAADAPEIDGVVYVEPATKAS
KRYKVGDFVSVKITGADGHDLWGEV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgctcgggtgcccaaaggcgctcgtcgactccgagcagatcatcacgcaactg
cgcgccgaaggctacgaaatctccggcacctatgacggcgcggatctcgtcgtcgtcaac
acctgcggcttcatcgacgaagcggtccaggaaagcctcgacgcgattggcgaagcgctc
gcggaaaacggcaaggtgatcgtcaccggctgcctcggcgcgaagaagagcgcgagcggc
tccggcctcatcgaggaagtgcacccgaaggtgctcgccgtcaccggcccgcatgcggtc
ggcgaagtgatgcaggtcgtgcacagccatctgccgaagccgcacgatccgttcgtcgat
ctcgtgccggccgcgggcatcaagctcacgccgcgccactacgcgtatctgaagatctcc
gaaggctgcaatcaccgctgctcgttctgcatcattccgtcgatgcgcggcgatctcgtg
tcgcggcccgtcgccgaggtgatgctcgaagccgagaacctgttcaagtccggcgtgaag
gaactgctcgtgatctcgcaggacacgagcgcgtacggcgtcgacgtcaagtaccgcacg
ggcttctggaacggacggccgctcaggacgcggatgaccgagctcgtcggcgcgctcggc
gagctcgccgcgcagtacggcgcgtgggtgcgtctgcattacgtgtatccgtatccgcac
gtcgacgaaatcatcccgatgatggcgcaaggcccgctcaaggaccacgtgctgccgtat
ctcgacgtgccgttccagcacgcgcacccggacgtgctcaagcgcatgaagcgcccggcg
aacgcggagcgggtgctcgagcgcgtgcagaagtggcgcgagatctgtccggatctgacg
attcgcagcacgttcatcgcgggctttccgggcgagaccgaagcgcaattcgagacactc
ctcgacttcattcgcgaggcggagctcgatcgcgtcggctgcttcgcgtattctccggtc
gagggtgcgagcgcgaacgagctcgacggcgcgctgcccgacgacatgcgcgaggcgcgc
cgcgcgcgcttcatggaagtcgccgaggaggtgtcggccgcgcgcatcgaacgcaaggtc
ggcaagacgctcaaggtgctgatcgacgaggtcaacgaagagggcggcgtcggccgcacc
gcggccgacgcgcccgagatcgacggcgtcgtctacgtcgagccggcaacgaaggcgtcg
aagcggtacaaggtcggcgatttcgtgtccgtgaagatcacgggcgccgacggccacgat
ctttggggcgaggtctga
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