Burkholderia humptydooensis MSMB43: AQ610_11050
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Entry
AQ610_11050 CDS
T04266
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud03420
Nucleotide excision repair
bud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AQ610_11050
03430 Mismatch repair
AQ610_11050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bud03400
]
AQ610_11050
Enzymes [BR:
bud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AQ610_11050
DNA repair and recombination proteins [BR:
bud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AQ610_11050
MMR (mismatch excision repair)
Other MMR factors
AQ610_11050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALX42896
LinkDB
All DBs
Position
1:complement(2465846..2468218)
Genome browser
AA seq
790 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIRQGYASPATVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDSFNRKFVELYQAYEQQCQR
EGVVDFPELLLRCHELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGGHNAI
FAVGDDDQSIYAFRGANVGNMRDFENEFRVRNLIKLEQNYRSHGNILDAANHLIANNAHR
LGKNLRTDAGHGEPVRVYEAATDAQEAAWIVEEIRSLVNTGLARSEVAVLYRSNAQSRSI
EHTLMTAGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYDCSMAAAIPYVTGKAGSSLSSFANLIAKMRAETAQMSLPETVEHVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDTPARSIPLHARASAAPELAAGGA
DPADAVLAPANLADPAQNPDAMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FAAVFITGLEEGLFPHENSALESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQHVLKWLTPKVEAGARWGGRSDNAGWGRDWFARPGGGGGGARAGVVDAA
VSAPLPAFANQQREAENGFRIGQQVFHTKFGEGTVTALEGSGTDAKAQVKFKRHGEKWLA
LAVAKLQAVE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgcgaacctgaaccccgaacaactcgccgccgtcacgttgccgaac
gagccggcgctgatcctcgccggggcgggcagcggcaagacccgcgtgctcatcacgcgg
atcgcgtggctgatccggcagggctatgcgtcgcccgcgacggtgctcgccgtcacgttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtccgcgatgatgccgatcgacacg
cgcggcatgtggatcggcacgttccacggcctctgcaaccggatgctgcgcgcgcactac
cgcgacgcggggctgccgcagacattccagatcctcgacacggccgaccagctctccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaagtacccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgccccgacaaggtcgacgcgacc
gacagcttcaaccgcaagttcgtcgagctgtaccaggcgtacgagcagcagtgccagcgc
gagggcgtcgtcgatttccccgagctgctgctgcgctgccacgagctgctcgcgcacaac
ccgccgctgcgcgcgcactaccaggcgcgcttcaagcacatcctcgtcgacgagttccag
gacacgaacaagctgcagtacgcgtggctcaagctcctcgcgggcggccacaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctatgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgagaacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cgctcgcacggcaacatcctcgatgcggcgaaccaccttatcgcgaacaacgcgcaccgg
ctcggcaagaacctgcgcaccgacgcgggccacggcgagcccgtgcgcgtctacgaagcg
gccaccgacgcgcaggaggcggcgtggatcgtcgaggagatccgctcgctcgtgaatacg
ggcctcgcgcgcagcgaggtcgcggtgctgtaccggagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgacggcgggcattccgtaccgcgtgtacggcggcctgcgcttcttc
gagcgccaggaagtgaagcacgcgctcgcgtatctgcgcctcatcgacaatccgaacgac
gacaccgcgttcgcgcgcgtcgtcaacttcccgacgcgcggcatcggcgcgcgctcgatc
gagcagctcgccgacgccgcgcggctgtacgactgctcgatggcggccgcgattccgtac
gtgacgggcaaggcgggctcgagcctttcgtcgttcgcgaacctgatcgcgaagatgcgc
gcggaaaccgcgcagatgagcctgcccgagacggtcgagcacgtcgtgcgcgcgagcggc
ctcgccgatttctatcaaggcgagcgcgagggccaggatcgcctcgagaacttgcaggaa
ctggtgaacgcggccaccgcgttcgtctccgaggaaggctacgggctcgatacgcccgca
cgctcgattccgctgcatgcgcgcgcgagcgcggcgccggagctcgcggcgggcggcgcc
gatccggccgatgcggtgctcgcgcccgcgaacctcgccgatcccgcgcagaacccggat
gcaatgacgccgcttgccggcttcctgtcgcacgcgtcgctcgaggcgggcgacaaccag
gcgcaggcgggccaggacgcggtgcaactgatgacggtccacgcggcgaaggggctcgag
ttcgccgcggtgttcatcaccgggctcgaggaagggctctttccgcacgagaacagcgcg
ctcgaatccgacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacccgctac
aacatccgctcgcgcttcttcgacgagctgccgcagcacgtgctcaagtggctcacgccg
aaggtcgaggcgggcgcgcgctggggcggccgctcggacaatgccgggtggggccgcgac
tggttcgcgcggccgggcggcggtggcggcggcgcgcgcgcgggcgtcgtcgacgcggcg
gtgtccgcgccgctgcccgcgttcgcgaaccagcagcgcgaggccgaaaacggctttcgg
atcggccagcaggtattccacacgaagttcggcgaaggcacggtgacggcgctcgaaggc
agtggcaccgacgcgaaggcgcaagtcaaattcaagcggcacggcgagaaatggctcgcg
ctcgcggtcgcgaaactgcaggcggtcgaatga
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integrated database retrieval system
