KEGG   Burkholderia humptydooensis MSMB43: AQ610_11855
Entry
AQ610_11855       CDS       T04266                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bud  Burkholderia humptydooensis MSMB43
Pathway
bud03030  DNA replication
bud03430  Mismatch repair
bud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AQ610_11855
   03430 Mismatch repair
    AQ610_11855
   03440 Homologous recombination
    AQ610_11855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bud03032]
    AQ610_11855
   03400 DNA repair and recombination proteins [BR:bud03400]
    AQ610_11855
Enzymes [BR:bud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AQ610_11855
DNA replication proteins [BR:bud03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AQ610_11855
DNA repair and recombination proteins [BR:bud03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AQ610_11855
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ALX43034
LinkDB
Position
1:2646577..2647302
AA seq 241 aa
MRQIILDTETTGLNARAGDRIIEVGCVELLNRRLTGSNLHFYVNPERDSDPGALAVHGLT
TEFLSDKPKFAEIVDQLRDFVRDAELIIHNAPFDLGFLDAEFALLGLPSFTDHCAGVIDT
LVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
DEAGDAHRNSNEPRMAFSGLDLPVLAATGEELAAHEAQLDALDKSVKGSCVWRKEAAAGE
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgccagatcattctcgataccgaaaccaccggcctgaacgcccgcgcgggcgaccgc
atcatcgaagtcggctgcgtcgagctgctgaaccggcggctcaccggcagcaacctgcac
ttctatgtgaatcccgagcgcgacagcgatccgggcgcgctcgcggtgcacggcctcacg
accgaattcctgagcgacaagccgaagttcgccgaaatcgtcgatcagttgcgcgacttc
gtccgcgacgcggaactgatcatccacaacgcgccgttcgacctcggctttctcgacgcc
gagttcgcgctgctcggcctgccatccttcaccgaccactgcgcgggcgtgatcgacacg
ctcgtgcaggccaagcagatgttccccggcaagcgcaattcgctcgacgcgctgtgcgac
cggttcggcatcagcaacgcgcaccggacgctgcacggcgcgctgctcgactcggaactg
ctcgccgaggtatatctcgcgatgacgcgcgggcaggaaagcctcgtcatcgacatgctc
gacgaagccggcgacgcgcaccgcaacagcaacgagccgcggatggcgttcagcgggctc
gacctgccggtgctcgccgcgaccggcgaggagctcgccgcgcacgaggcgcagctcgac
gcgctcgacaagtcggtcaagggctcgtgcgtgtggcgcaaggaagcagcggccggcgag
gcctga

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