Burkholderia humptydooensis MSMB43: AQ610_12210
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Entry
AQ610_12210 CDS
T04266
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AQ610_12210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bud03400
]
AQ610_12210
Enzymes [BR:
bud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AQ610_12210
DNA repair and recombination proteins [BR:
bud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AQ610_12210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALX43095
LinkDB
All DBs
Position
1:complement(2720930..2724274)
Genome browser
AA seq
1114 aa
AA seq
DB search
MLHLFYSNRHETLADALLDDLAFASDGAGPWAAQQVIVPSAALSRRLELDVAKRHGVCAN
VRFSYLAQWLWAQIGEVLTVPAHSPFAPDRLVWRCYRLLSDAGAAPWRGSPRLAAYLAAA
DAPMRHELAHRIATVFDHYLTYRPEWLAQWRDGESIFALEGAPRHGGEAARDDEAWQAAL
WRALLAELSDSGMPPAHRFLREAGAFDPDVIARAQAKWPDAVSVFALPTMPPLHIALLRE
LSRWIDVRIYALNPCREFWFDIVTAARAESLDAADQLDYQQVGHPLLAEWGRQTQAQLHM
LHELTESAAASDASRYAENAAPTWLARVQNAILDLQPEDALGAPPAERGVEVHVCHSLAR
QLEVLHDRLLAWFDADPSLAPSDVLVAMPDLAAAGPLIDAVFGTSSGADAARIPYRITGL
PPSQANPVARVLLDWLALPERNVGAPELVEWLRADAIAARYGIDATALETVQTWLAASGA
RRGLAPDAQEPPNAAVPAPRHTFADALTRLFLGYAMPDGAAPVSAWLPIAGAEGGEAELL
GRLARFTDDLDGFAQRIARDLTPQGWGDVFADALARFFDSGPAFADALSVVRDALDAMLA
AMAEGAGGAELPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRIVCLIGMDD
GVLPSLARADEFDLMAVFAKLGDRQRRDDERNLFLDLLLAARERLLIAYTGRSIRDNAPL
PPAALVDELLDHLATAAAGPDASPAAVDAARRAFVIEHPLQPFSADYFAPGGALFTYDAS
RATLARLLAEGGREEASAFFSEPLPAEPAEPVAFADFERFWRHPARSLLRARLGIALSDA
QAELVDTEPFELDYAGSDALAERVLPLLIETADAAAFEHALRVADASPEVPGGATGAVRR
DHELDALAQLAGNVRRALADGAARMPFAFDIAPAWPVAGDAPWFGEHDAALAAAATREPL
RLHGALARLTAAGQVIYRYARPGARDYLSAWLAHLVYCTIDPDGPRRTLWLGSGDTFEFA
PVAAPLEQLAPLAALFRAGRRMPLAFFPRSAWALVSESESKAAGVWINDRVASEADDAAL
ALAWRGANPSLDEPFGALAHLVFDPLVEHLRRAS
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctactcgaaccgccacgaaacgctggccgacgcgctgctcgacgat
cttgcgttcgcgtcggacggcgcgggcccttgggccgcgcagcaagtgatcgtgccgagc
gcggcgctgagccggcggctcgagctcgacgtcgcgaagcggcacggcgtatgcgcgaac
gtgcgcttcagctatctcgcgcaatggctgtgggcgcagatcggcgaagtgctgacggtg
cccgcgcattcgccgttcgcgcccgatcgtctcgtgtggcgctgctatcggctgctgtcg
gacgcaggcgcggcgccgtggcgcggctcgccgcggctcgccgcctatctggccgcggcc
gatgcgccgatgcgccacgagctcgcgcaccggatcgcgacggtgttcgaccactacctg
acgtatcgtccggagtggctcgcgcagtggcgggacggcgaatcgatcttcgcgctcgaa
ggcgcgccgcgtcacggcggcgaggccgcgcgcgacgacgaggcgtggcaggccgcgctc
tggcgcgcgctgctcgcggagctgtccgacagcgggatgccgcccgcgcaccggttcctg
cgcgaggccggcgccttcgatcccgacgtgatcgcgcgcgcgcaagcgaagtggccggat
gcggtcagcgtgttcgcgctgccgacgatgccgccgctgcacatcgcgctgttgcgcgag
ctgtcgcgctggatcgacgtgcgcatctatgcgctcaatccgtgccgcgaattctggttc
gacatcgtcacggccgcgcgcgccgagtcgctcgacgcggcggaccagctcgactatcag
caggttggccatccgctcctcgccgaatggggcaggcagacgcaggcgcaactgcacatg
ctgcacgagctgaccgagagcgcggcggcgagcgatgcgtcgcgctacgcggagaacgcc
gcgccgacgtggctcgcgcgcgtgcagaacgcgatcctcgatctgcagcccgaggatgcg
ctcggcgcgccgcccgccgagcgcggcgtcgaagtgcacgtgtgccatagcctcgcgcgt
cagctcgaggtgctgcatgaccgcctcctcgcgtggttcgacgcggacccgagcctcgcg
ccgtcggacgtgctcgtcgcgatgccggatctcgcggcggcggggccgctcatcgacgcg
gtgttcggcacgtcttcgggcgccgacgccgcgcgcattccgtaccggatcaccggcctg
ccgccatcgcaggcgaatcccgtcgcgcgcgtgctgctcgactggctcgcgctgcccgag
cgcaacgtcggcgcgccggagctcgtcgagtggctgcgcgccgacgcgatcgccgcgcgc
tacggaatcgacgcgacggcgctcgaaaccgtgcagacgtggctcgcggcgtcgggcgcg
cggcgcgggctcgcgcctgacgcgcaggagccgccgaacgctgccgtgcccgcgccgcgc
cacacgttcgccgatgcgctcacgcggctcttcctcggctacgcgatgcccgacggcgcg
gcgcctgtttcggcgtggctgccgatcgcgggcgcggaaggcggcgaggccgagctgctc
ggccggcttgcgcgcttcaccgacgacctcgacggtttcgcgcaacgcatcgcccgcgac
ttgacgccgcaaggctggggcgacgtgttcgccgacgcgctcgcgcgcttcttcgattcg
gggccggcgttcgccgacgcgctgtccgtcgtgcgcgacgcgctcgacgcgatgctcgcc
gcgatggcggaaggcgcgggcggcgccgagttgccggccgccgtcgtgcgcgcgggcctc
gcggccgcgctcgacgatccggcgcgcggcggcgtgccgtggggcggcgtcacgttctcg
tcgctgacgagcctgcgcgggctgccgtatcgcatcgtgtgcctgatcgggatggacgac
ggcgtgctgccgagccttgcgcgcgcggacgagttcgatctgatggccgtgttcgcgaag
ctcggcgaccgccagcggcgcgacgacgagcgcaatttgttcctcgacctgctgctcgcc
gcgcgcgagcgcctgctgatcgcgtacacgggccgcagcatccgcgacaacgcgccgttg
ccgcccgccgcgctcgtcgacgaactgctcgaccatctggcgacggcggcggccgggccg
gacgcgtcgcccgccgcggtcgacgccgcgcgccgcgcgttcgtgatcgagcatccgctg
cagccgttctcggccgactacttcgcgccgggcggcgcgctcttcacgtacgacgcgtcg
cgcgcgacgctcgcgcgcctgctcgccgaaggcgggcgggaggaggcgtccgcgttcttt
tcggaaccgctgccggccgagcccgcggagcccgtcgccttcgccgatttcgagcgcttc
tggcgccacccggcgcgctcgctgctgcgcgcgcggctcggcatcgcgctctcggacgcg
caggcggagctcgtcgataccgagccgttcgagctcgattacgcgggcagcgacgcgctt
gccgagcgcgtgctgccgctcttgatcgagacggccgatgcggccgcgttcgagcatgcg
ctgcgcgtcgccgacgcgagccctgaagtgccgggcggcgcgacgggcgcggtgcggcgc
gaccatgagctcgacgcgctcgcgcagctcgcgggcaacgtgcggcgtgcgctcgccgat
ggcgcggcgcgcatgccgttcgcgttcgacatcgcgcccgcgtggcccgtggcgggcgat
gcaccgtggttcggcgaacacgacgccgcgctcgccgcggcggcgacgcgcgaaccattg
cgcctgcacggcgcgctcgcgcggctgacggctgcggggcaggtgatctaccgctacgcg
cggccgggcgcgcgcgattatctgtccgcgtggctcgcgcatctcgtctattgcacgatc
gatcccgacgggccgcgccgcacgctgtggctcggctccggcgacacgttcgaattcgcg
cccgtcgccgcgccgctcgagcagctcgcgccgcttgccgcgctgttccgcgcggggcgc
cggatgccgctcgcgtttttcccgaggagcgcgtgggcgctcgtatcggagagcgaatcg
aaggcggcgggcgtgtggatcaacgatcgcgtcgcgagtgaggccgacgacgcggcgctc
gcgctcgcgtggcgcggcgcgaatccgtcgctcgacgaaccgttcggcgcgctcgcgcat
ctcgtgttcgatccgctcgtcgagcatctgcggagggcgtcatga
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