Burkholderia humptydooensis MSMB43: AQ610_16135
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Entry
AQ610_16135 CDS
T04266
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AQ610_16135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bud03400
]
AQ610_16135
Enzymes [BR:
bud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AQ610_16135
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AQ610_16135
DNA repair and recombination proteins [BR:
bud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AQ610_16135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
ALX43788
LinkDB
All DBs
Position
1:complement(3630157..3630987)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPFVAGRRVQRVDVRTAMLRWPVPAGFAELLRLREVLRVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPNDAPPPAPAKHDHVDWIFDEFVLRFRDPRRFGAVLWH
PRDAGDVHAHPLLASLGVEPFSAAFSGALLFKRTRGRTVSVKQALLAGDIVVGVGNIYAS
ESLFRAGIRPTTAAGRVSLPRYERLADAVRATLAAAIERGGSTLRDFVGSNGESGYFQLD
CFVYDRAGEPCRVCGAAIRQIVQGQRSTYFCPNCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccggaagtcgaggttacgcgccgaggcatcgagccgttcgtcgccggg
cggcgcgtgcagcgcgtcgacgtgcgcaccgccatgctgcgctggcccgtgcccgccggc
ttcgccgagctgctcaggttgcgcgaggtgctgcgcgtcgagcggcgcggcaagtacctg
ctgttcgaagtcgacgccggatggttcatcgtccatctcggcatgacgggcacgctgcgc
gtgctgccgaacgacgcgccgccgcccgcgccggcgaagcacgatcacgtcgactggatc
ttcgacgagttcgtgctgcgctttcgcgatccgcgccgcttcggcgcggtgctctggcat
ccgcgcgacgcgggcgacgtgcacgcgcatccgctcctcgcgagcctcggcgtcgagccg
ttctcggccgcgttctcgggcgcgctcctcttcaagcgcacgcgcgggcgcacggtgtcc
gtcaagcaggcgctgctcgcgggcgacatcgtcgtcggcgtcggcaacatctatgcgtcc
gaaagcctctttcgcgccggcatccggccgaccacggcggcggggcgcgtatcgctgccg
cgctacgagcggctcgccgacgcggtgcgcgcgacgctcgccgccgcgatcgagcgcggc
ggcagcacgctgcgcgacttcgtcggcagcaacggcgagagcggctatttccagctcgac
tgcttcgtctacgatcgcgcgggcgagccgtgccgcgtctgcggcgcggcgatccgccag
atcgtccaggggcagcgatccacctatttctgtccgaattgtcagcgttaa
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