Burkholderia humptydooensis MSMB43: AQ610_22280
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Entry
AQ610_22280 CDS
T04266
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AQ610_22280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bud03019
]
AQ610_22280
03009 Ribosome biogenesis [BR:
bud03009
]
AQ610_22280
04131 Membrane trafficking [BR:
bud04131
]
AQ610_22280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bud04147
]
AQ610_22280
Messenger RNA biogenesis [BR:
bud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AQ610_22280
Ribosome biogenesis [BR:
bud03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AQ610_22280
Membrane trafficking [BR:
bud04131
]
SNARE
SNARE associated proteins
Others
AQ610_22280
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AQ610_22280
Exosome [BR:
bud04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AQ610_22280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
AAA_2
AAA_28
CDC48_2
IstB_IS21
AAA_33
NPHP3_N
nSTAND3
Mg_chelatase
AAA_18
RNA_helicase
AAA_17
ATPase_2
AAA_7
TsaE
NACHT
ABC_tran
NB-ARC
AAA_25
Parvo_NS1
Rad17
AAA_lid_PRS2_C
Sigma54_activat
ORC-CDC6-like
SLFN-g3_helicase
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
ALX45227
LinkDB
All DBs
Position
2:complement(732042..734183)
Genome browser
AA seq
713 aa
AA seq
DB search
MDKAEQGGLQLRVTEGNARDVGRALARMGPEDLALLDAAVGDLVEVRGKRATVCKAMLAH
KELRAQSRVQLDGVVRGNAGAGIDELVTLKKVAARPANLVQLTPINAAPAPGDLDYIAGL
LDGLPVIEGDRIRATLFGSRCADFKVTSCTPRGPVLIGPNTELSIGRPAKGEPAVVAPSL
SYEDVGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAIAHE
CDAAFFSVSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKRETVVGEVE
KRVVAQLLALMDGLSGRQQVIVIAATNLPNTLDPALRRPGRFDREIAIPIPDRNGRLEVL
EIHSRGMPLAADVDLDRLADITHGFVGADLEALCKEAAMLCLRRLMSTLDLGLRSISYEQ
LDRLVVNMDDFLSALAEIDPSAIREVFVEVPNVRWEDVGGLGNAKAQLIEALEWPLKYPE
LLTRAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRD
VFRKARHAAPCLLFFDEIDALAPRRSEGATGAHVPERLLSQFLAEFDGIEELKGVMVLAA
TNRIDMLDPAVLRPGRFDEIIEIALPDPAARREIFDVHLRRKPLAADVASDRMAEESSGF
SAAEIASVCRRAALSAVRRAVAEDIRDPARLHLSTADLTDAIQEARQRRKQTQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagcggaacagggcgggctccaactgcgcgtgacggaaggcaacgcccgcgac
gtcggccgggcgctcgcgcgcatggggccggaggatctcgcactgctggacgcggcggta
ggcgatctggtcgaagtgcgcggcaagcgtgccaccgtatgcaaggccatgctcgcgcac
aaggaactacgcgcccagtcgagggtgcagttggacggcgtcgtccgcggcaacgccggc
gccggtatcgacgagctcgtcacgctgaaaaaagtggcggcgcgtccggcgaacctggtg
caactgacgcccatcaacgccgcccccgcgccgggcgatctcgactacatcgcgggcctg
ctcgacggcctgccggtgatcgagggcgaccgcatccgcgcgacgctgttcggcagccgc
tgcgcggatttcaaggtgacgagctgcacgccgcgcggaccggtgctgatcggcccgaac
accgagctgtcgatcggacggcccgcgaagggggagcctgcggtggtcgccccgtcgctg
tcgtacgaggatgtcggcggcctcaagccgcaattgatgcgcatccgcgaaatgatcgag
ctgccgctgcgctatcccgaagtcttcgagcggctcggcgtcgacgcgcccaaaggggta
ttgctgtacggcccgccgggttgcggcaagacgctgattgcgcgggccatcgcacacgaa
tgcgacgcggctttcttctcggtgtccggccccgaagtcatccacaagttctacggcgaa
tcggaggcgcatctgcgcaagatcttcgaggaagccgcgcgcaaggcccccgccatcgtt
tttctggacgaagtggatgcgatcgcgcccaagcgcgaaactgtcgtcggcgaagtggaa
aagcgcgtggtcgcgcaactgctagcgttgatggacggattgagcggccgtcagcaggtc
atcgtgatcgccgccaccaatctgcccaacacgctcgatccggcattgcgccggcctggc
cgcttcgatcgcgaaatcgcgattccgatccctgatcgcaacggccgtctcgaggtgctc
gaaatccacagtcgcggcatgccgctcgcggccgacgtcgacctggatcgtctcgccgac
atcacccacggtttcgtcggcgcagatctcgaggcgctgtgcaaagaagcggcaatgctt
tgcctgcgtcgtctcatgtcgacactcgatctcggcctgcgctcgatttcctacgagcag
ctcgatcgcctcgtcgtgaacatggacgatttcctgtccgcgttggccgagatcgatccg
tcggcaatccgcgaggtcttcgtcgaagttcccaacgtgcgctgggaagatgtcggcggc
ctcggcaacgcgaaggcgcagttgatcgaagcgctggaatggccgctcaagtatccggaa
ctgctgactcgtgcgggcgccaagccttccaagggcatcctgctcgtcggcccgcccggt
tgcggcaagacttggctcgcgaaggccgcggccaatgagtgcggcgtcaatttcattcct
gtcaaaggaccggagttgatgtcgaaatacatcggcgaatcggaaaaaggcgtgcgcgac
gtgttccgcaaagcacggcacgcggcgccctgcctgctgtttttcgacgaaatcgatgcg
cttgccccccggcgcagcgaaggcgcaaccggcgcgcatgtgccggagcgtctgttgtcg
cagtttctggccgaattcgacggcatagaggaactaaaaggcgtgatggtactcgccgcc
acgaaccgcatcgatatgctcgatccggccgtgctgcgtcccggccgcttcgacgagatc
attgaaattgcgctgccagacccggctgcgcgccgcgagattttcgacgtgcacctgcgc
cgcaagccgctcgccgccgacgtggccagcgaccggatggcggaggaaagcagcgggttc
tccgccgccgagatcgcctcggtgtgccgccgcgcagcgctgtcggccgtgcggcgcgcg
gtcgccgaggatatccgcgatccggcgcggctgcatctgagcaccgcagacctgaccgat
gcgatccaggaagcaaggcagcggcgcaagcagacccaatga
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