Burkholderia humptydooensis MSMB43: AQ610_30850
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Entry
AQ610_30850 CDS
T04266
Name
(GenBank) type IV secretion protein Rhs
Organism
bud
Burkholderia humptydooensis MSMB43
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
AHH
RHS
Motif
Other DBs
NCBI-ProteinID:
ALX46728
LinkDB
All DBs
Position
2:complement(2710736..2715346)
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AA seq
1536 aa
AA seq
DB search
MALPAVKHMDPVVGIDVHSVIVTPGLPPVFLPHPHIGFMLDLREYIAAAKGVIGSIAMTI
AEDAVLDYLEDHPDDRKKLTDALNSLKDQKKQATSDPWVAKALKLNREVSSIKGDVAGAV
GAGVGMGAAAGRPIFVNGLMRATAGTHSFHVPGLHFPLGETFAPPDPLPSDDAESYMGSR
TVLANNDPMSFLALPAMSCWAEGIEPPPHNGAHTTRTHESMPSSVMLPIPVGRPVLVGGP
PVMNMAAAAKGMFKAFQGSKWAKNLADKLHLKSGFLRCTVLKAEPVDVTTGEVVVQQNDF
TVSGRLPLVWDRYYASQDRHPGAVGFGWQTPADIRLELMRNEDGIGAVAHFPDHATAFNV
VPADDGWPARTYDWQHGHALYGDDGRMVLRTREGIEYGFVLPSRWRDSVAALDGDDSRLT
LPIDRMADLNGNAWVFERDMYGGLVRLVEWKRDGQTERLVECGTGRGLHAGLLTSLTLID
AGGNAHPLVSYEHDRERNLAAAIDAMAHPHHFEYAVGHRMVSHTSARGVSFYYSYQQDDD
GVWRVDHAWGDNGLFDYRFVYDRARMETRVTNSLGHTTITQMNERGMPVAEIDPLGGVTG
YRYDAQGRASAQTDPAGRTTAWEYDAYGSLVVQTLPDGSTIRTEFDSYHRPVCMTLIGGR
QWRYEWDTFGNLLAQIDPSGAISRYTYDEYGQLVEHTGPRGASMRFDYHRDGNLAARIDA
LGHRTQYRYDARGYLIEAIDALGQQSKYEYDRNGNLTRAIEPGGREIRCVYDAEGNLSRY
CDPMGHVTQMEYSALGEVNRRLAPDGTTVEYRYDTEEQLIGVVNERGELYALERDALGRI
VVETDYWGQARRYRYGAAGELLCSTDPLGQTVEYRYDWLGRIVQKRVPHPEQDDALQIDS
FAYDRHGDLVLAENPSCRVEFGYDAAGRVIEERQGDDFTIASDYDEAGNRIERRTRLVAG
GAVVEHAVRYTYDALDAATSIRIDDTAPVVLERDALGQICIEQLGTELRRELSYESGGQL
ASQRTLLAGTGALFASEYTYDANGELVEKRDSRGGIERFQYDPVGRVIAHLDPAGQLRRY
LYDPAGDLLKTYIRERRTADAAAAAKTGTWVREGEYEGCYYAYDRVGNLIRKQDAAQDLT
LRWDAAGQLVETVAVRPDLATSGEKPAHIRARYEYDPFQRRIRKVVYAGASGGASQQPLS
HLSRFFWDGNTLVGEYAAGGEGSGASDLDIDGDIRSSSLTSLEHDRTDTGMLPVASRVCE
WIYYPESFRPLAIVQGDLAEGRLSARLSRQLVPNAGTVYFYQNDPNGAPVRMHDASGRAV
WEARYRPRGDVECTGRWIVQPLRLQGQYHDQESGLHYNRYRYFDPSPGYFISQDPIGLKG
GEYPYQFAPNTLIWSDPLGLAFGDPASGALDRALGGTVGDKMQAHHLIPQAVWNRHSSFF
NAIGMGGGRDLAHNGILMPDSSSGIGSKAGERIYHRGSHPSYNAMVESKVAKIEAALHSN
AITKADAKMHVKSLQRSLRRKIFRGKIKTKRTCKLT
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgccggccgtcaagcacatggaccccgtcgtcgggatcgacgtgcattcggtg
atcgtcacgccggggctgcctccggtgttcctgccgcatccgcatatcggcttcatgctc
gatctgcgggaatacattgcggccgcgaagggggtgatcggcagcattgcgatgacgatc
gccgaagacgcggtgctggattacctggaggaccatcccgacgaccgcaagaaactgacc
gatgcgctcaattcgctcaaggaccagaagaagcaggccacgagcgatccgtgggtcgcg
aaggcgctgaagctcaatcgcgaagtgtcgtcgatcaagggcgacgtggcgggcgcggtg
ggcgcgggcgtcgggatgggggccgccgcaggcaggccgatcttcgtgaacgggctgatg
cgcgcgacggcgggcacgcattcgtttcatgtgccggggctgcacttcccgctgggcgaa
acgttcgcgccgcccgacccgctgccgtccgacgacgccgaatcgtacatgggcagccgg
accgtgctcgcgaacaacgatccgatgtcgttcctggcgctgcccgcgatgagctgctgg
gccgaggggatcgagccgccgccgcacaacggcgcgcatacgacgcgcacgcatgagtcg
atgccgagttcggtgatgctgccgattcctgtcggccgtccggtgctcgtcggcgggccg
cccgtgatgaacatggcggcggccgccaaggggatgttcaaggcgtttcagggatcgaag
tgggcgaagaacctcgcggacaagctgcatctgaagtcgggatttttgagatgcacggtg
ctgaaagcggagccggtcgacgtgacgacgggcgaagtggtcgtgcagcagaacgacttc
accgtgtcaggccgcttgccgctcgtgtgggatcgctattacgcgagtcaggatcgccat
ccgggcgcggtgggcttcggctggcagacgccggccgatatccggctcgagctgatgcgc
aacgaagacgggatcggcgcagtcgcgcattttccggatcatgcgaccgctttcaacgtg
gtgccggcggatgacggctggccggcgcgcacctatgactggcagcatgggcacgcgttg
tatggcgacgatgggcggatggtgctgcgcacgcgcgaggggatcgaatacggattcgtg
ctgccttcccgttggagggattcagtcgcggcgctcgatggcgacgattctcgactcacg
ctgccgatcgatcgcatggccgatctcaacggcaatgcgtgggtgttcgagcgcgacatg
tatggcgggctcgtgcgtctcgtcgaatggaagcgcgacgggcagacggagcgtctggtc
gaatgcggtacgggcagggggctgcacgccgggttgttgacgtcgctgacgttgatcgat
gcgggcggaaacgcacatccgctcgtgagctacgagcatgaccgcgagcgtaatctggct
gcggcgatcgacgcgatggcgcatccgcatcatttcgaatatgcggtcgggcatcggatg
gtgagccacacgagcgcgcggggcgtgtcgttctactacagctatcagcaggacgacgac
ggcgtgtggcgcgtcgatcatgcgtggggtgataacgggctattcgattaccgcttcgtc
tacgatcgtgcgcggatggagacgcgtgtcaccaattcgctcgggcatacgacgatcacg
cagatgaacgagcgcgggatgcctgttgctgaaatcgatccgctaggcggcgtgaccggg
taccggtatgacgcgcaggggcgtgcgagtgcgcagaccgatcccgcggggcggacgacg
gcttgggaatatgacgcgtatggcagtttggttgtgcagacattgccggatgggagcacg
atcaggacggaatttgattcctatcaccgcccggtctgcatgacgttgatcggcggccgg
cagtggcgctacgagtgggatacgttcggcaatctgctcgcgcagatcgatccctcgggg
gcgatatctcgctatacctatgacgagtacggccagcttgttgaacacacagggccgcgc
ggtgcgagcatgcgattcgattaccaccgggacggcaatctcgcggcgcggatcgatgcg
ttggggcatcgcacgcagtatcggtacgatgcgcgcggatacctcatcgaagcaatcgat
gcgctcgggcaacaaagcaaatacgagtatgaccgcaacggcaatttgacgcgcgcaatc
gagccgggcgggcgtgagattcgctgtgtgtacgacgctgaaggaaacctgtctcgctat
tgcgatcctatgggccacgtgacgcagatggaatactcggcgctcggagaggtcaacaga
cggctcgcgcccgacggtaccaccgttgaataccgctacgacacggaagaacaactgatc
ggcgtcgtgaacgaacgcggcgagctatatgcgctcgaacgcgatgcgctggggcggatc
gtcgtggagacggactactgggggcaagctcgacgctatcggtatggcgcggcgggtgaa
ctgctttgtagcactgatcctctggggcagacagtcgaataccgatacgattggctgggg
cgcatcgttcagaagcgcgtgcctcatccggagcaggacgatgctcttcagatcgacagc
tttgcatacgatcggcacggggacttggtgctcgcggagaatccgtcttgtcgcgtcgag
ttcggttacgacgcagcgggccgcgtgatcgaggagcgacagggtgacgatttcacgatc
gccagtgattacgacgaagccggcaaccggattgaacgcaggacccggcttgttgccggg
ggcgcggttgtcgagcatgccgtccgctatacatacgacgctttggatgctgccacgtcg
attcggatcgacgacacggcgccggtcgtgcttgagcgagatgcacttgggcagatttgc
atcgagcaattgggcacggagttgcggcgtgaactgtcgtacgaatccggcggacagctt
gcctcgcagcggacactgctggcaggtaccggcgcgcttttcgcaagcgaatatacgtac
gacgcgaatggcgaattggtcgaaaagcgcgactctcggggcggcatcgagcgctttcaa
tacgatccggtggggcgggtgatcgcgcacctcgaccccgctgggcaattgcgtcgctat
ttgtacgaccctgccggcgatttgctgaagacgtacattcgggagcgccgcacggcggat
gcagccgctgcggcaaagaccggcacttgggtgcgtgaaggtgaatatgaaggctgctac
tacgcgtacgacagagtcggcaaccttattcgaaagcaggacgccgcacaggacctgacg
ctgcgttgggatgcggccgggcagctcgttgagacggtggcggtgcggccggatcttgcc
acttcaggggagaagccagcgcacatccgcgcgcggtatgaatacgatccgttccagcgg
cggattcgtaaagtcgtgtatgcgggagcatcaggcggggcatcgcagcagccactgtca
catctgagccggttcttttgggacggcaatacgcttgttggggagtacgcagcgggaggg
gagggaagtggtgcctcggatctggacatagacggagatatacggtcgtcgtcactcact
tcgctggagcatgaccgaactgacacaggaatgctacccgtcgctagccgtgtgtgcgag
tggatttactatccggaatcgttccggccgctcgctattgtgcaaggcgatctggctgag
gggaggctatcggcgcgactatcgaggcaactagtaccgaacgcaggaacggtgtatttt
taccagaatgatccgaacggggcgcccgtacggatgcatgatgctagtgggagggctgta
tgggaggcgcgttatcgccccaggggtgacgtcgaatgcactgggcgatggatcgtgcag
ccactcaggttgcagggacagtatcacgatcaggaaagtgggctgcattacaaccgctat
cggtactttgatccaagtcctggttacttcattagccaagacccgatcggattgaagggg
ggggagtatccgtatcagttcgccccaaacacactaatttggagcgatcccttaggcttg
gcctttggcgatcctgctagcggtgctttagatagagcattgggtggaacagttggtgac
aagatgcaggctcatcacttgatcccgcaggcggtatggaatcgccattcgtccttcttt
aacgctatcggcatgggcggcggccgtgatttggcccataatgggatactgatgccagat
agctcatcaggcattgggagtaaagctggtgagcgcatctatcaccgtggaagccatcca
agctataacgcaatggtagaaagtaaagtggcaaaaatcgaggctgcgctacacagtaat
gccattacgaaagctgatgcgaagatgcatgtgaagtccttgcagcgcagcttgcgcagg
aagattttcagagggaaaataaaaaccaaaagaacttgcaagctaacttaa
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