Caballeronia cordobensis: BRPE67_ACDS00030
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Entry
BRPE67_ACDS00030 CDS
T03604
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bue
Caballeronia cordobensis
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bue03032
]
BRPE67_ACDS00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ACDS00030 (gyrB)
Enzymes [BR:
bue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BRPE67_ACDS00030 (gyrB)
DNA replication proteins [BR:
bue03032
]
Prokaryotic type
DNA Topoisomerases
BRPE67_ACDS00030 (gyrB)
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRPE67_ACDS00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
AKAP7_RIRII_bdg
Motif
Other DBs
NCBI-ProteinID:
BAO85058
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All DBs
Position
1:3448..5931
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AA seq
827 aa
AA seq
DB search
MTENTNSQPDNKPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DEALAGYCDDIHVVIHADNSISVTDNGRGVPTGLKRDDKHDPKRSAAEIVMTELHAGGKF
DQNSYKVSGGLHGVGVSCVNALSEWLRLTVRRDGKKHFMEFARGVVQNREIVEEDGVQYS
PMPVVGDTENRGTEVHFLADATIFGNVEFHYDILAKRMRELSFLNNGVRIRLTDQRTGKE
DDFAFAGGVKGFVEYINKAKQVLHPTVFHAIGERENVTVEVAMQWNDSFNESVLCFTNNI
PQRDGGTHLTGLRAAMTRVINKYIVDNEIAKKAKVETTGDDMREGLSCVLSVKVPEPKFS
SQTKDKLVSSEVRAPVEEIVAKALEDYLQETPNDAKIITGKIVDAARARDAARKAREMTR
RKGVLDGIGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNV
EKARFDKLISSEQIVTLVTALGCGIGKDDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTF
FYRQMPEIVERGYIYIAQPPLYKIKAGKDERYMKDAHELNQHMLKLALQGSELTASEGAD
PISGDALGELARAYLLAQAVVDRLSRIYDATALEAVMDGVIIDLSSEEAAAASAKRLEER
LRADPLKPEVSVEAAYDQVRELRSLRIKRRHHGNVKVSVFDEDLQLTADYKQLVSTADTF
KGLIGEGALIKRGERSMAVNDFKSAMKWLIADAERNVSKQRYKGLGEMNPEQLWETTMDP
NVRRLLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacacaaattcgcaacccgacaacaagcctgacaacagctacggcgcctcg
tcgatccagatcctcgaaggtctggaggctgtgcgcaagcggccgggcatgtatatcggc
gacacgtcggatggcaccggtttgcatcacctcgttttcgaagtgctggacaactccatc
gacgaagcgctggcgggctattgcgacgacattcacgtcgtcattcacgcggacaattcg
atctccgtcaccgataacggccgcggcgtgccgaccggcctcaagcgcgacgacaagcac
gatccgaagcgcagcgccgccgaaatcgtcatgacggagctgcacgcgggcggcaagttc
gaccagaacagctacaaggtgtcgggcggcctgcacggcgtgggcgtctcgtgtgtgaac
gcgttgtcggaatggctgcgcctcaccgtgcgccgcgacggcaagaagcacttcatggag
ttcgcgcgcggcgtcgtgcagaaccgcgagatcgtcgaggaagacggcgtgcagtattcg
ccgatgcctgttgtcggcgacacggaaaaccgcggcaccgaggtgcactttctggcggac
gcgaccatcttcggcaatgtcgaattccactacgacattctcgccaagcgcatgcgcgag
ctttcgttcctgaacaacggcgtgcgtatccgcttgacggaccagcgcaccggcaaggaa
gacgatttcgcgttcgcgggcggcgtgaagggtttcgtcgagtacatcaacaaggcgaag
caggtgctgcatccgaccgtgttccacgcgatcggcgagcgcgagaacgtgaccgtcgaa
gtggcgatgcagtggaacgacagcttcaacgaaagcgtgctctgcttcacgaacaacatt
ccgcagcgcgacggcggcacgcaccttacgggcctgcgcgcggcgatgacgcgcgtcatc
aacaagtacatcgtcgataacgagatcgcgaagaaggcgaaggtcgagacgaccggcgac
gacatgcgcgagggtttgtcgtgcgtgctctcggtgaaggtgccggagccgaagttcagc
tcgcagacgaaggacaagctcgtgtcgtcggaagtgcgcgcgccggtggaagaaatcgtc
gcgaaggcgcttgaagattatctgcaggaaacgccgaacgacgcgaagatcatcactggc
aagatcgtcgatgcggcgcgtgcgcgtgacgcggcgcgcaaggcgcgcgaaatgacgcgc
cgcaagggcgtgctcgacggcatcggcttgccgggcaagctcgcggattgccaggagaag
gacccggcgaagtcggagatttatatcgtcgagggcgattcggcgggtggatcggccaag
caggggcgcgaccgcaaattccaggctattttgccgttgcgcggcaaggtgctgaacgtc
gagaaggcgcgcttcgacaagctgatctcgtccgagcagatcgtcacgctggtgacggcg
ctgggctgcggcatcggcaaggacgattacaacctcgacaagctgcgttatcaccgcatc
atcatcatgaccgatgcggacgtcgacggcgcgcacatccgcacgctcttgctgacgttc
ttctatcggcaaatgccggagatcgttgagcgcgggtatatctatatcgcgcaaccgccg
ctgtacaagatcaaggcgggcaaggacgagcggtatatgaaggacgcgcacgagctgaat
cagcatatgttgaagctcgcgctgcaagggtcggaactgactgcgagcgagggcgccgat
ccgatttccggcgacgcgctcggtgagttggcgcgcgcgtacttgctggcgcaggcggtg
gttgaccgcttgagccgtatttacgatgcaacggcgttggaagcggtgatggacggcgtg
atcatcgacttgtcatccgaggaagcagcggctgcttcggcgaaacggctggaagagcgc
ttgcgtgccgatccgctgaagccggaagtgtcggtggaggccgcgtacgatcaggtgcgg
gaactgcgttcgctgcgtatcaagcggcgtcatcatggcaacgtgaaggtgtcggtgttc
gatgaagaccttcagttgaccgccgactacaagcagctcgtttcaacggcggatacgttc
aagggtttgatcggcgaaggcgcgttgatcaagcgcggcgagcggtcgatggccgtgaac
gacttcaagagcgcgatgaagtggctgatcgcggatgcggagcggaatgtttcgaagcag
cgctataagggtctgggtgagatgaaccccgagcagctctgggaaacgacgatggacccg
aacgtgcggcgtctgctgcgcgtgcagatcgaagacgcgattgcggcggatggtattttc
actacgctcatgggcgatgacgtggagccgcggagggcgtttatcgagagtaatgcgttg
cgggcggggaatattgatgtttga
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