Caballeronia cordobensis: BRPE67_ACDS03990
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Entry
BRPE67_ACDS03990 CDS
T03604
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bue
Caballeronia cordobensis
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bue03016
]
BRPE67_ACDS03990 (miaB)
Enzymes [BR:
bue01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BRPE67_ACDS03990 (miaB)
Transfer RNA biogenesis [BR:
bue03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BRPE67_ACDS03990 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BAO85454
LinkDB
All DBs
Position
1:complement(431044..432414)
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AA seq
456 aa
AA seq
DB search
MTKKVYVKTFGCQMNEYDSDKMVDVLGAAEGLVKTDTPEDADVILFNTCSVREKAQEKVF
SDLGRVRELKEANPNLLIGVGGCVASQEGASIVARAPYVDLVFGPQTLHRLPAMIDQRRA
TGRAQVDISFPEIEKFDHLPPARVDGPSAFVSIMEGCSKYCSYCVVPYTRGEEVSRPLDD
VLTEIAGLADQGVREVTLLGQNVNAYRGALTLGSSEIADFATLIEYVAEVPGIERIRYTT
SHPKEFTQRLIDTYAKVPKLVSHLHLPVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRP
DLSLSTDFIVGFPGETEDDFNKMMALVDEMRYDTSFSFIYSPRPGTPAANLHDDTPREVK
LKRLQHLQATIEENVQRISASMVGKTERILVERPARKDPNELAGRTQNNRVVNFPAPAAS
HARLIGQMIDVKIVHAYPHSLRGELVLAPETTAVAY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaaagtttatgtaaagacctttggctgccagatgaacgagtacgactccgac
aagatggtcgacgtactcggcgcggcggaaggactcgtcaagacggacacgcccgaagac
gcggacgtcattctgttcaacacgtgctcggtgcgcgagaaggcccaggagaaagtgttc
tccgatctcggccgcgtgcgcgagctcaaggaagccaacccgaatctgctgatcggcgtc
ggcggttgcgtcgcgagccaggaaggcgcgtcgatcgtcgcgcgcgcgccgtatgtcgat
ctcgtgttcggcccgcaaacgctgcatcgcctgcccgcgatgatcgatcagcgccgcgcc
accggccgcgcgcaggtcgacatctcgttcccggaaatcgagaagttcgatcacttgccg
cccgcacgcgtcgacggtccgagcgcgttcgtgtcgatcatggaaggctgctcgaaatat
tgcagctattgcgtcgtgccgtacacgcgcggcgaagaagtctcgcgcccgctcgacgac
gtgctcaccgaaatcgccggcctggcggatcagggcgtgcgcgaagtcacgctgctcggc
cagaacgtgaacgcttaccgcggcgcgctgacgctcggttcgtccgaaatcgcggatttc
gcgacgctcatcgagtacgtcgccgaagtgccgggcatcgaacgcattcgttacaccacg
tcgcatccgaaggaattcacgcagcgtctgatcgacacctacgcgaaggtgcccaagctc
gtgtcgcatctgcatttgccggtgcagcacggctccgaccgcattctgatggcgatgaaa
cgcggctataccgtgctcgaatacaagtcggtcattcgcaagctgcgcgcgattcgcccg
gatttgtcgctgtcgacggacttcatcgtcggctttcccggcgagaccgaggacgatttc
aacaagatgatggcgctcgtcgacgagatgcgctacgacacgagtttctcgttcatctac
agcccgcgccccggcacgcccgccgcgaatctgcacgacgacacgccgcgcgaagtcaag
ctcaaacgcctgcaacatcttcaggcgacgatcgaggaaaacgtgcagcgcatcagcgct
tcgatggtcggcaaaaccgagcgcattctggtcgaacgcccggcgcgcaaggacccgaac
gagctcgcgggccgcacgcagaataatcgcgtcgtcaatttccccgcgccggcggcatcg
catgcgcgcctgatcgggcagatgatcgacgtgaagatcgtgcacgcgtatccgcattcg
ctgcgcggcgaactggtgctcgcgccagagacgaccgcagtggcttattga
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