Caballeronia cordobensis: BRPE67_ACDS07480
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Entry
BRPE67_ACDS07480 CDS
T03604
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bue
Caballeronia cordobensis
Pathway
bue02020
Two-component system
bue02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BRPE67_ACDS07480
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BRPE67_ACDS07480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bue03021
]
BRPE67_ACDS07480
Transcription machinery [BR:
bue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BRPE67_ACDS07480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BAO85803
LinkDB
All DBs
Position
1:complement(815065..816534)
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AA seq
489 aa
AA seq
DB search
MPPTLELRAKQTLALTPRLQQSVRLLQLSSLEFQQELRNALDTNPFLEYDESQTEDNALG
ADNGSSTTTADTAAEAPLTSEPSMESEASADTSSRDDAVSDFSSDPFGRGASRGNGDGEG
SDPADWVRIEPSLHETLHDALRLYQLNERDRAIAQLIIEALDDDGYLRQELSELAGVVEI
EPALSEDELVIALRLVQSLDKPGVGARSLSECLSLQLEALDEETPGRAVALEIVRHHLER
LARREQAELQKKIGCSADELRIACALVRRLDPKPGENYGSSEDNYVVPDVIVRQAKKQWV
VTINPAVLPRARIHRMYAELFAQSAGASRSPLAQQLQEARWLIRNAQQRFTTIQRVAECI
VSHQKAFFDYGEIALKPLVLRDVADELGLHESTISRATGNKYMATPRGIFEFKHFFPREL
STESGGTCSAAAVRALLKEMISKENTRDPLSDVSLAKMLADQGVIVARRTVAKYRHLMKV
PPAELRRQA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctacactcgaactccgcgcaaagcaaacgctggcgctcacgccgcgcctccag
cagtcggttcgtctcctgcaactctcgtcgctggagtttcagcaggaattgcgcaacgcg
ctggatacgaatcccttcctcgaatacgacgagtcgcagaccgaagacaacgccctcggc
gccgacaacggcagttccacgacgaccgccgacacggcggccgaagccccgctcacgtcc
gaaccgagcatggagagcgaagccagcgcggacaccagttcccgcgacgatgccgtgagc
gacttctcgtccgatccgttcggccgcggcgcttcgcgcggcaatggcgacggcgaaggt
tccgatcccgccgactgggtgcgcatcgagccgtcgctgcatgagacgctgcacgacgcg
ctgcgcctctatcaactgaacgagcgcgaccgcgcgattgcgcaactcatcatcgaagcg
ctcgatgacgacggctatctgcgtcaggagttgagcgagcttgcgggcgtcgtcgagatc
gaacccgcgctgagcgaggacgagctcgtcatcgcgctcaggctcgtgcagtcgctcgac
aagccgggcgtcggcgcgcgctcgctctccgaatgcctctccctgcaactcgaagcgctc
gacgaagagacgccgggccgcgctgtcgcgctcgaaatcgtcaggcatcatctggagcgg
ctcgcacggcgcgagcaggcggagttgcagaagaagatcggctgcagcgcggatgaactg
cgcatcgcgtgcgcgctcgtgcgccgtctcgatccgaagccgggcgagaactacggttcg
agcgaggacaactacgtcgtgccggacgtcatcgtgcgtcaggcgaaaaagcaatgggtc
gtgacgatcaacccggcggtgctgccgcgcgcgcggattcatcgcatgtacgccgagttg
ttcgcgcagtcggcgggcgcgagccgttcgccgctcgcgcagcagttgcaggaagcgcgc
tggctgatccgcaacgcgcagcagcgtttcacgacgatccagcgcgttgccgagtgcatc
gtttcgcatcagaaggcgttcttcgattacggcgagattgcgctcaagccgcttgttctg
cgcgatgttgccgacgagcttggcctgcacgaatcgaccatttcacgcgcgacgggcaac
aagtacatggcgacgccgcgtggcattttcgagttcaagcacttcttcccgcgggagttg
agcaccgagagtggtggcacgtgttcggccgcggccgtgcgggcgcttctgaaggaaatg
atctcgaaggaaaatacgcgcgatccgctgtcggatgtgagtcttgcgaagatgcttgcg
gatcagggggtgatcgtcgcgcggcgcacggtggcgaagtatcggcatttgatgaaggtg
ccgccggcggagttgcggcggcaggcttga
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