Caballeronia cordobensis: BRPE67_ACDS12870
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Entry
BRPE67_ACDS12870 CDS
T03604
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bue
Caballeronia cordobensis
Pathway
bue03030
DNA replication
bue03430
Mismatch repair
bue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRPE67_ACDS12870
03430 Mismatch repair
BRPE67_ACDS12870
03440 Homologous recombination
BRPE67_ACDS12870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bue03032
]
BRPE67_ACDS12870
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ACDS12870
Enzymes [BR:
bue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRPE67_ACDS12870
DNA replication proteins [BR:
bue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRPE67_ACDS12870
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRPE67_ACDS12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
NACHT
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAO86342
LinkDB
All DBs
Position
1:1389134..1390171
Genome browser
AA seq
345 aa
AA seq
DB search
MIYPWQTGDWQRLQQLRAHWPHALLLHGEAGIGKLQFAQHLAQGLLCETPAASGEPCGAC
PACLWFSQGNHPDYRAVLPEALAGLAAGNADADASAEKADGDDGKKTRAPSKEIKIEQVR
ALLDFCGVGSHRGGLRVVLLYPAEALNVAAANALLKTLEEPPSGVVFLLVSARIDRLLPT
IISRCRQWPMSVPQPDEARTWLASQGVDDPVGVLAQAGGAPLAALALANDENRALRDFTL
AQLAAGPNCDAFACGENLQKLPVPLVLGWLQRWLYDVLAQRTAGRPRYFPGAAKALSRCA
QSADPAALARYMKTVTRQRAVENHPLNARLVFEELFIGYRGIYTA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatctatccctggcaaaccggcgactggcagcgtcttcagcaattgcgcgcgcactgg
ccgcatgcgcttttgctgcatggcgaagccggcatcggcaagctgcagttcgcgcagcac
ctggcgcaaggactgctttgcgagacgcccgccgcgagcggcgagccgtgcggcgcgtgc
ccggcatgcctgtggttttcgcaaggcaatcatccggattaccgcgccgtgctgcccgaa
gcgcttgccgggctcgccgccggtaacgccgacgccgacgcatccgccgaaaaagccgat
ggcgacgacggcaagaagacccgtgcgccgagcaaggaaatcaagatcgagcaggtgcgc
gcgctgctggacttctgcggggtcggctcgcatcgcggcggcctgcgcgtcgtgctgctg
tatccggcggaggcattgaacgtcgcggccgccaacgcgctcttgaagacgctggaagaa
ccgccctcgggtgtcgtgttcctgctcgtgtcggcgcgcatcgaccggctgctgccgacc
atcatcagccgatgccgccagtggccgatgagcgtgccgcaaccggacgaagcgcgtaca
tggctggcgtcgcaaggcgtcgacgatcccgtgggagtcctcgcgcaggcgggcggcgcg
ccgctggccgcgctggcgctcgccaacgacgaaaaccgcgcattgcgcgacttcacgctc
gcgcaactcgccgccggcccgaactgcgacgccttcgcttgcggcgagaatctgcagaaa
ctgccggtgccgctcgtgctcggctggctgcagcgctggctctacgatgtgctcgcacag
cgcacggcgggccgtccgcgttattttcccggcgcggcgaaggcgctgtcgcgctgcgcg
cagagcgcggaccccgcggcgctcgcgcggtacatgaaaacggtcacgcggcagcgcgcg
gtggaaaatcatccgctgaacgcgcgtctcgtgttcgaggaactgttcatcggctatcgc
gggatctatacggcctga
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