Caballeronia cordobensis: BRPE67_ACDS13350
Help
Entry
BRPE67_ACDS13350 CDS
T03604
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
bue
Caballeronia cordobensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BAO86390
LinkDB
All DBs
Position
1:complement(1444061..1450375)
Genome browser
AA seq
2104 aa
AA seq
DB search
MYMFKHSSRCESARAVTSALFVEDGCGKKRRIVVALALAVASVAPLFVPVAARAQCNRSA
NPARPSAPAQTNFSNQSFGAAPLPQYYLDASGQAGCKGADDGSWNGKGQDGFAGQSGGSF
NSVNSGISVKGGFAPNPISPTIGAGWSVNGGDGGAGGQGGYDDDGSAHTGNGGAAGNGGS
VSVQFSGTVGPDSKGVLPEVALDVEANGGTGGAGAVSNAQGIEPLYGGNGGSGGQGGQAA
LDASGNIQFYGVGLRASARGGAGGAGGDSPTPGDLAVEGHGGKGGNGGAGGTATLAYQNG
SLTASTPLGQIFPMQANADGGRGGNAGDALGGSGSFGGTGGNGGYGGTASAALGSGGQIV
FSDQMQPVNSQYQPGSGITATANGGAGGGGGAAIDGTIRNEGGTGGNGGNAGSASATVLG
AIDYTASVPAGQSTAGLIGGEGVLVQANGGAGGVGDGAQSTIVGEGGNGGKAGAGGSASL
TLGDATNTAAIKTNGPYTHGALVQSIGGGGGNGGSVSFALSGTGGAGAAGGDGGAVTVNS
DHAFVTAGSTSGEGSIPLIAQSIGGGGGSGGDASGVTAGAGFQIGGNGGQGGNGGAVKLT
LGQNSVFGSLDQSGGAGILAQSIGGSGGNAGSATSKGGGLITMVIGGDARGGGSGGQVTV
DNGALVTTYGDHAAGIKAQSIGGGGGNGGNATALTVGGPLTSSVAIGGQGGGGGAAGAVS
LTNTGQVATYGSDAEGVVLQSIGGGGGSGGSATARAVAASGSPNIPSISVSAAIGGAGGT
GNTGGNVTLDNSGLITTAGDSATGVFAQSVGGGGGTGGDATAASYSASPAKGASLSVSVA
LGGSGGSGGTGGAVSLENAGLIATLGQDAHGVFAQSIGGGGGNGGTGDASATAANAKASF
SASIAVGGTGGTGGTGGTVGLTNDGSIATRGDGADAVFAQSVGGGGGAGGGGTAAASGGK
AAIAVGVGGKGGVGGDGNTVTTINNGNIVTRGAASTGIFAQSVGGGGGKGGKGAAAAGGS
GGLDTISNAQTLFGILGQGLGLNQDVQNVGDNILQVGALGEKIKATYGDLQKLFTQPDGV
SKVLGTVSQISVGVSVGGSGGAGGQGGAVNTTNAGAIGTYGAQSHGIFAQSIGGGGGSGG
AASSVGKSNNDSKVQAAVAVGGSGGAAGSGGAVSVAQKTGGAIETQGVEAFGVYAQSVGG
GGGNGAMSGAVSGSLKSLSIAVGGNGGGAGNGGTVSVDNNGAVTTLGKHSVGIFAQSIGG
GGGVVTTASSDETFDPSKIIVNPQGRLADVYGVTLSFGGRNGSSGNGGEVTVNTEGNVTT
SGLDAHGIVAQSIGGGGGFVAGGQIANTTSGAGNAKGDGGKVLVVDTNNTVATSGDGAYG
IVAQSIGGGGGFAGDPSAPQGYGGATNTAVLANSGNGGTVNVLVANGGKVVTTGRYAPAI
FAQSIGGGGGLVVSNYSAANLPNVMGEGSAGGAGAGGPVFVNVRNNDTVMATGVGSAGIL
AQSDGQTGGQISINLAPGSKVIGGTTDPNFPTGKMVGQYDEYRDAAAIRILGGNNNVINN
QGTIQTLGKYAILVNPTTYGGVPTGTITVNNSGTITGDIDTLGGPSNIHNLPGGVINTPT
TLNVGGGTVNNAGTLTVGGANSAGKTVLTGNLVQSSTGALNVQIDPANKRSDLLDITGTA
ALAGKVQVEPVSYLKSTSTVLTAAGGIQPDATLAGTSTPVYRFTPLMQGNTVAIRTDADF
VGASKGASATQQSVAANLDRLWNSADPAFAPIFGAFGNVGSTAGYAQTLTAVSGQELLGI
AAARYQASQAFARSVFSCPVFADDDTAVRKQGSCVWFRATGMWENRSADASFPGFGWQGT
TMKVGGQIELQPGWFLGGALGYETDRFTGNDNLTSANGNALLGVVALKHEVGPWTFTGAA
DASYGWMNSSRVIPSANTVATASPDSFNVGLHLRAAYQIPFDRFYLEPALDADLNDINLP
GYTESGAGALNLKVKSANNFIATGTPNLRIGTRAQVGSATVDAYVGAGVSFIAGNTYTTN
ASFAAAPGYGSFTNTLTNAHVAGKFSAGVEVFTAKRLDVRLEYDGVVAAHEVENGGQVRL
KYRF
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgttcaagcattcatcgcgttgtgagtctgcgcgggcagtgacgtcggcactt
tttgtggaggatggctgcgggaagaagcgccggattgtggttgcgctggcattggccgtc
gcgtcagttgccccgctattcgttccggtcgcggcgcgagcccagtgcaacaggagcgcc
aatcccgcgcggccctcggccccggcacagaccaacttctccaatcagtcgtttggtgcc
gcgccgcttccccagtattacctggacgcctcggggcaggcgggatgcaaaggcgccgac
gacggctcctggaacggaaagggccaggatggcttcgccggtcagtcgggtggttccttt
aacagcgtcaacagcggcatttcggtgaagggaggcttcgcgccgaaccccatcagcccc
acgatcggagcgggatggtccgtcaacggcggtgacggcggtgccggcggacagggcggt
tatgacgacgatggctccgcccacacgggaaacggcggagcggctggcaatggcggctcg
gtctccgtgcagtttagcggcacggtgggtcccgactcgaagggcgtccttccggaagtt
gcgctcgacgtagaagccaatggcggcaccggcggagcgggcgccgtgtccaatgcccag
ggcattgagccgctctatggcggaaacgggggatcagggggacagggtggtcaggcagcg
ctcgacgcctccggcaatattcagttctatggcgtcggcctgcgagcgtccgcccggggc
ggagccggcggggcgggtggcgactcgcccactccgggcgatcttgccgtggaaggccat
ggaggcaagggcggcaatggcggcgccggcggtaccgcgacacttgcgtatcagaacggc
agtctgaccgccagcacccctttaggccagatcttcccgatgcaggctaacgccgatggc
ggtagaggcggcaatgcgggtgacgcgctcggtggaagcggcagttttggcgggaccggc
ggcaacggaggttacggcggcacagccagcgcggcactcggcagcggtggccagatcgtc
ttctccgatcagatgcaaccggtgaacagtcagtatcagccgggcagcggcatcaccgcc
acggcgaatggtggcgcgggcgggggcggtggcgctgccatcgacggcacgatacgcaac
gagggtggtacgggcggcaacggcgggaatgccggcagcgcgagcgccaccgtgcttggt
gccatcgattacaccgcgagtgttccggccgggcagtccactgccgggttgatcgggggt
gagggggtgctggtgcaggccaacggaggcgccggcggtgtcggtgacggcgcccagagc
acgatcgtgggtgaaggcggcaatggcggtaaggcaggcgctggcgggagcgcttcgctg
actctcggagacgcgacgaacacggcggcaatcaaaacgaacggcccctatacgcatggc
gccctggtgcaaagtatcggcggcggcgggggcaatggcggcagtgtcagcttcgcgctg
tccggcacgggcggtgcaggtgccgcgggcggcgatggcggtgcggtcacggtgaactcg
gaccacgcctttgtcacggccggcagcacatcaggcgaaggcagcattccgctgatcgcc
cagagcatcggcggtggcggcggaagcggcggcgacgcgagcggcgtcaccgcgggtgcg
ggttttcagatcggcggcaacggcggccagggcggcaatggcggcgcggtgaaactcacg
ctgggccagaacagcgtatttggcagcctcgaccagagcggtggcgcggggatcctcgcg
caaagcatcggcggctccggcggcaacgccggcagcgcgacgtcgaaaggcggagggctg
atcaccatggtgatcggtggggacgcccgcggtggcggctcgggcggccaggtcacggtc
gacaacggcgcactcgtcacgacctacggcgaccacgcagccggtatcaaggcccagtcg
atcggcggcggcggcggcaatggcggcaacgctacagcgctcacggtcggcgggcccctg
acgagctcggttgccattggcggacaaggcggcggaggcggcgcggcgggcgcggtttcg
ctgaccaacacggggcaggtcgcgacgtatggttcggatgccgaaggtgtcgtgctgcaa
agcatcggcggcggcggtggctccggcggcagcgccacggcgcgtgccgttgccgcatcg
ggtagccccaacattccatcgatcagtgtcagcgccgcgatcggcggcgccggcgggacc
ggaaacaccggcggcaatgtcacgctcgataattccggtctgatcaccacggcgggcgac
agcgcgaccggcgttttcgcgcaatccgtcggcggcggcggtggtacgggcggcgacgcg
accgccgcgtcctactccgcgtccccggccaagggggcgtccctgtcggtctccgtggcg
cttggaggcagcggcggcagcggtggcacgggtggcgccgtcagcctggaaaacgccggg
ctgatcgccaccttgggccaggacgcccacggcgtgttcgcacagtcgattggcggtggc
ggcggcaatggcggcacgggcgatgcctcggcaacggcggctaacgccaaagccagcttc
agcgcgtcgatcgcggtgggcggaacgggtggaacgggagggacgggcggcacggtcggc
ctgaccaacgacggttcgatcgcgacgcgcggcgacggcgcggatgccgtgttcgcccag
agcgtgggcggcggcggcggcgcaggcggcgggggtaccgccgcggccagcggcggcaag
gctgccatcgccgtgggtgtgggcggcaagggtggcgtcggcggcgacggcaacacggtg
acgacgatcaacaacggcaacatcgtcacccgcggcgcagcctcgaccggcatcttcgcg
caaagcgtcggcggcggcgggggcaaaggcggcaagggtgcggcggctgcgggcggcagc
ggcggcctcgacacgatctccaacgcccagaccctgttcggcattctgggtcagggcctc
ggcctcaaccaggatgtgcagaacgtgggcgacaacatcctgcaggtcggcgcgctcggc
gaaaaaatcaaagcgacttatggtgatctgcaaaaactcttcacgcagccggatggggta
tcgaaagttctgggcaccgtgtcacagatcagcgttggcgtgtcggtcggcggcagcggc
ggcgcgggtggccagggcggggcggtgaacaccaccaacgccggcgcgatcggcacctat
ggcgcgcaatcccacggcatcttcgcgcagagcatcggcggcggcggtggcagcggcggc
gcggcgagttcggtcggcaagtcgaacaatgattcgaaggtgcaggccgcggtcgccgtg
ggcggcagtggcggcgcggccggctcgggcggcgcggtgagtgtcgcgcagaaaacgggt
ggcgcaatcgagacgcagggcgtggaagcgtttggcgtgtatgcgcagagcgtaggcggc
gggggcggcaacggcgcgatgtcgggggcggtcagcggttcgctgaaaagcctgtcgatc
gcggtgggcggcaatggcggaggcgccgggaatggcggcaccgtgagcgtcgacaacaac
ggcgcggtcacgacactgggcaagcacagcgtcggtatcttcgcgcaaagcatcggcggt
ggcggcggtgtcgtgacgaccgcgagcagcgacgagacgttcgatccctccaaaatcatc
gtgaatcctcagggacggctcgccgacgtctacggggtgacactgagcttcggcggtcga
aacggcagttcgggaaatggcggcgaagtcacggtcaacacggaaggcaacgtgacgacg
agcgggcttgacgcgcacggtatcgtcgcgcaatcgatcggcggcgggggcggcttcgtg
gcgggcggacagatcgcgaacacgacctccggcgccggcaacgcgaagggcgatggcggc
aaggttctcgtcgtggacaccaataacactgtcgccaccagcggcgacggtgcgtatggg
atcgtcgcgcaatcgatcggcggtggcgggggctttgcgggcgacccgtccgccccgcag
ggctacggtggcgcgacgaacaccgcggtactggccaacagcggcaatggcggcaccgtc
aacgtcctcgtggcaaacggcgggaaggttgtgacgaccggccggtacgcgccggcgatc
ttcgcgcaatcgatcggcggtggcggcggtctggtggtctctaactacagcgcagccaac
ctgccgaatgtgatgggagagggcagcgcgggtggcgcgggcgcgggcggcccggtcttc
gtcaacgtgaggaataacgacaccgtcatggcgacaggcgtcgggtccgccggcatcctg
gcgcagagcgacggccagacaggcgggcaaatctcgatcaacctggcgcccggctcgaaa
gtcatcggcggcacgaccgatcccaatttcccgacgggcaaaatggttgggcagtacgac
gagtatcgcgacgctgccgcgatccgcatactggggggcaataacaacgtcatcaacaac
caggggaccatccagaccctgggcaaatacgcgatcctggtgaaccccacgacgtacggg
ggcgtgcccaccggcaccatcacggtcaacaactccggcacgatcaccggtgacatcgat
acccttggtggccccagcaatatccacaatctgcccggtggcgtgatcaacacacccacc
acgctgaacgtcggagggggcacggtgaacaatgccggcacgctcacagtcggcggcgcc
aactcggccggcaagacggttctcaccggcaatctcgtgcagagttcgactggcgcgctg
aacgtccagatcgatccggccaacaagcgctccgatctgctcgacatcacgggtactgcc
gcgcttgccggcaaggtgcaggttgagccggtgagctatctgaagagtacgagcaccgtg
ctgacggcggccggcggaattcagccggatgcgacgcttgcgggcacctcgacgcccgtc
taccggttcacgccattgatgcagggcaacaccgtcgccatcaggaccgatgcggatttc
gtgggtgcgagcaagggtgcttcggccacacagcagagcgttgcagccaatctggaccgg
ttgtggaatagcgccgatcccgcctttgcgcccatcttcggcgcctttggcaacgtcggt
agcacggcgggttatgcccagacgctgaccgccgtctcgggccaggagctgctcggcatc
gctgcggcgcgctaccaggccagccaggcattcgcgcgctccgtattcagttgcccggtg
ttcgccgacgacgacaccgccgtgagaaagcagggctcgtgcgtgtggttccgcgccacg
ggcatgtgggaaaaccgcagcgccgacgcttccttcccgggcttcggctggcaaggtacg
acgatgaaagtcggcggtcagatcgagcttcagcccggctggttcctcggtggcgccctt
ggctacgagaccgaccgcttcaccggcaacgacaacctgacgagcgccaatggcaatgcc
cttctcggagtcgtcgcgctcaagcacgaggttgggccgtggacattcaccggtgcggcg
gacgccagctacggctggatgaacagctcgcgcgtcattccgagcgccaatacggtggcg
actgcctcgcccgattcgttcaatgtcggactgcacttgcgcgcggcgtaccagattccg
ttcgaccgcttctacctggagcctgcgctcgacgccgatctgaacgatatcaatctcccg
ggctacacggagagcggtgcgggcgcactcaatctgaaggtgaagagtgcgaacaatttc
attgcgaccggcacgccgaatctgcggatcgggacgcgcgcgcaggtcggatcagcgaca
gtcgacgcctatgtcggcgccggggtgagcttcattgcgggcaatacctacacgaccaac
gcgtccttcgcggctgccccgggttacggcagcttcacgaatacgctcaccaatgcgcac
gtcgcgggcaagttctccgccggggtggaggtgtttacggccaaacgcctcgatgtgcgt
ctggagtatgacggcgtagtggccgcacacgaagttgaaaacggcggacaggtgcggctg
aagtataggttttga
DBGET
integrated database retrieval system
