Caballeronia cordobensis: BRPE67_ACDS15590
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Entry
BRPE67_ACDS15590 CDS
T03604
Name
(GenBank) probable DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
bue
Caballeronia cordobensis
Pathway
bue03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BRPE67_ACDS15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ACDS15590
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BRPE67_ACDS15590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF1045
DUF3284
Motif
Other DBs
NCBI-ProteinID:
BAO86614
LinkDB
All DBs
Position
1:complement(1676745..1677647)
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AA seq
300 aa
AA seq
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MPHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRSMDPIGYKQINKNTGKEVTRDN
IVRGFEYEKGKYVVMTDAEIRAANPESTQTVDILAFVDAPDISFLSLDTPYYLAPDRKGE
KVYALLRDALKDTGKVGIASVVLHNKQHLAALIPVGPALALNTLRWGDEVRDFTEFKFPD
ENTKKAGVTPKELEMAKRLIDDMSDTWDPSKYHDTFRDDIMALVDKKVKEGKVAEVMTIE
EGGDKPSADILDLSELLKRSLKKGGAAPAKRGTKAAQAEDEAAAETARPARKTTTRRKRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatatgatctggaaaggcgcgatcagcttcgggctggtccacgtgcccgtgcaa
ctctatccggcgacgcagtcggaaaaggtcggcttcaatctgctcgacaagcgctcgatg
gaccccatcggctacaagcagatcaacaagaacacgggcaaggaagtcacgcgcgacaac
atcgtgcgcggcttcgaatacgagaagggcaaatacgtggtgatgaccgacgccgaaatc
cgcgcggccaatcccgaatcgacgcagacggtcgatattctcgccttcgtcgatgcgccc
gacatctcgtttctctcgctcgatacgccgtattacctcgcgccagaccgcaagggcgaa
aaggtctatgcgctgctgcgcgatgcgctgaaggacaccggcaaagtgggcatcgcgagc
gtcgtgctgcataacaagcagcatctggccgcgctgattcccgtcgggccggcgctcgcg
ctcaacacgctgcgctggggcgacgaagtccgcgacttcaccgaattcaagttccccgac
gaaaatacgaagaaggccggcgtcacgccgaaggaactggagatggccaagcgcctcatc
gacgacatgagcgacacgtgggacccgtccaagtatcacgacaccttcagggacgacatc
atggcgctcgtcgacaagaaggtgaaggaaggcaaggtcgccgaagtcatgacgatcgag
gaaggcggggataagccgtcggcggatattctggatctgtcggaactgctcaagcgcagc
ctgaagaagggcggcgcggcgccggccaaacgcggcacgaaggccgcgcaagccgaggac
gaagcggccgcggaaaccgcgcgtcccgcacgcaagacgaccacgcgccgcaaacgcgcg
tga
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