Caballeronia cordobensis: BRPE67_ACDS15680
Help
Entry
BRPE67_ACDS15680 CDS
T03604
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bue
Caballeronia cordobensis
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bue03009
]
BRPE67_ACDS15680 (rimO)
Enzymes [BR:
bue01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BRPE67_ACDS15680 (rimO)
Ribosome biogenesis [BR:
bue03009
]
Prokaryotic type
ribosomal protein modification factors
BRPE67_ACDS15680 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BAO86623
LinkDB
All DBs
Position
1:complement(1685718..1687148)
Genome browser
AA seq
476 aa
AA seq
DB search
MDWPRATRNDILPVKNTLDSIAKTNPAPKIGMVSLGCPKALVDSEQIMTQLRAEGYEISG
TYDGADLVVVNTCGFIDEAVQESLDAIGEALSENGKVIVTGCLGAKKSASGTGLIEEVHP
KVLAVTGPHATNEVMNAVHAHLPKPHDPFTDLVPPAGIKLTPRHYAYLKISEGCNHRCTF
CIIPSMRGDLVSRPVADVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPLK
TRMTDLVGALGELASQYGAWVRLHYVYPYPSVDEVIPMMAEGPLRGHVLPYLDVPFQHAH
PEVLKRMKRPANAEKVLERVKTWREICPDLTIRSTFIAGFPGETEEQFQTLLDFLKEADL
DRVGCFAYSPVEGASANELDGALPDDVREDRRARFMELAEELSAKRMKKKVGKTLKVLVD
EVSTDGGVGRTAADAPEIDGVVYIAPATKASKRYKAGDFVSVKITGADGHDLWGEV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggattggcctcgtgcgaccagaaacgacattctccccgtgaaaaacactttagattca
atcgccaagacgaatcccgcgccgaaaatcggcatggtttccctcggctgcccgaaagcg
ctcgtcgattccgagcagatcatgacccagttgcgcgccgaaggttacgaaatctccggc
acgtatgacggcgcggacctcgtcgtcgtcaacacctgcggcttcatcgacgaagccgtg
caggaaagcctcgatgccatcggcgaagcgctctccgaaaacggcaaggtcatcgtgacc
ggctgtctcggtgcgaaaaagagcgcgagcggcacgggcctcatcgaagaagtgcatccg
aaagtgctcgccgtcaccggcccgcacgcgaccaacgaagtgatgaacgcggtgcacgcg
catttgcccaagccgcacgatccgttcaccgatctcgtgccgcccgccggcatcaagctc
acgccgcgtcactacgcgtatctgaagatttccgaaggctgcaaccatcgctgcacgttc
tgcatcatcccgtcgatgcgcggcgatctcgtgtcgcgtcccgtcgccgacgtgatgctc
gaagccgaaaatctcttcaagtccggcgtgaaggaactgctcgtgatttcgcaggacacg
agcgcctacggtgtcgacgtgaaataccgcaccggcttctggaacggcaagccgctcaag
acgcgcatgaccgatctcgtcggcgcgctcggcgaactcgcctcgcaatacggcgcgtgg
gtgcgcctgcattacgtgtatccgtatccgagcgtcgacgaagtcatcccgatgatggcc
gaaggtccgctcaggggccacgtgctgccgtatctcgacgtgccgttccagcacgcgcac
cccgaagtgctcaagcgcatgaagcgcccggccaacgccgaaaaggtgctcgaacgcgtg
aagacgtggcgcgaaatctgtccggacctgacgatccgcagcacgttcatcgcgggcttt
ccgggcgaaacggaagagcagttccagacgctgctcgatttcctgaaggaagcggacctg
gaccgcgtcggctgcttcgcgtattcgccggtcgaaggcgcgagcgcgaacgagctcgac
ggcgccttgcccgacgacgtgcgcgaggaccgccgcgcgcgcttcatggaactggccgaa
gagctgtcggccaagcgcatgaagaagaaggtcggcaagacgctgaaagtgctcgtcgac
gaagtgagcacggatggcggcgtcggccgcacggcggcggatgcgccggaaatcgacggc
gtcgtctacatcgcgccggcgaccaaggcatcgaagcgctacaaggccggcgacttcgtt
tcggtgaagatcaccggcgcggacggccatgatctctggggcgaggtgtaa
DBGET
integrated database retrieval system
