Caballeronia cordobensis: BRPE67_ACDS16740
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Entry
BRPE67_ACDS16740 CDS
T03604
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bue
Caballeronia cordobensis
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bue03016
]
BRPE67_ACDS16740 (truB)
Enzymes [BR:
bue01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BRPE67_ACDS16740 (truB)
Transfer RNA biogenesis [BR:
bue03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BRPE67_ACDS16740 (truB)
Prokaryotic type
BRPE67_ACDS16740 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAO86729
LinkDB
All DBs
Position
1:complement(1813108..1814031)
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AA seq
307 aa
AA seq
DB search
MKGGPKIPRRALDGVLLLDKPLGLSSNDALIKAKRIYLAKKAGHTGTLDPLATGLLPLCF
GEATKFSQDLLDADKTYEATMRLGIRTTTGDAEGEAIDTRDVTCDEAAVIDAMTKFLGDI
VQVPPMYSALKRDGKPLYEYARAGQTVEREGRPVTIHALQLIACALPLVTFRVTCSKGTY
VRTLAEDIGEALGCGAHLTALRRTGVGALTLDRAVTLDELANLSEAERDERLQPVDALLS
TFPEIRLDDEAARRFLHGQRLRLADVATTGLDEGRVRVYAQNDGRLLGVAKAGEGVLAPE
RLVVTAQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggcggtccgaagattccgcgccgcgcgctcgacggcgtgttgctgctcgacaaa
ccgctcgggctgtcgagtaacgatgcgctcatcaaggcgaagcgcatctatctcgcgaag
aaggcgggccacaccggcacgctcgatccgctcgcgaccggtttgctgccgttgtgcttc
ggcgaagcgacgaagttctcgcaagacctgctcgacgccgacaagacctacgaagcgacg
atgcgcctgggcatccgcacgacgacgggcgatgccgaaggcgaagccatcgacacgcgc
gacgtgacgtgcgacgaagccgcggttatcgacgcaatgacgaagtttctcggcgacatc
gtgcaagtgccgccgatgtactcggccttgaaacgcgacggcaaaccgctctacgaatac
gcgcgcgcaggccagaccgtcgagcgcgaaggccggccggtgacgatccacgcattgcag
ttgatcgcgtgcgcattgccgctcgtgacgtttcgcgtgacgtgcagcaagggcacctat
gtgcgcacgctggccgaggacatcggcgaggcgctcggttgcggcgcgcatctgacggcg
ttgcggcgcacgggcgtcggcgcgttgacgctcgatcgagccgtgacgctcgatgagctg
gcgaacctgagcgaagccgagcgcgacgaacgtctccaaccggtggatgcgctgttatcc
acgtttcccgaaatccgtctcgacgacgaagcggcaagacgcttcctccacggccagcgc
ctgcgtctcgcggatgtcgcgacgacggggctcgacgaaggccgcgtgcgggtctatgcg
caaaatgacggccgcctgctaggcgtggcgaaagccggagagggcgtgctggcgccggaa
agactggtcgtcacggcgcagtga
DBGET
integrated database retrieval system
