Caballeronia cordobensis: BRPE67_ACDS17530
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Entry
BRPE67_ACDS17530 CDS
T03604
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bue
Caballeronia cordobensis
Pathway
bue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRPE67_ACDS17530 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bue03019
]
BRPE67_ACDS17530 (pnp)
03016 Transfer RNA biogenesis [BR:
bue03016
]
BRPE67_ACDS17530 (pnp)
Enzymes [BR:
bue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BRPE67_ACDS17530 (pnp)
Messenger RNA biogenesis [BR:
bue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BRPE67_ACDS17530 (pnp)
Transfer RNA biogenesis [BR:
bue03016
]
Prokaryotic type
tRNA degradation factors
BRPE67_ACDS17530 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BAO86808
LinkDB
All DBs
Position
1:complement(1897286..1899424)
Genome browser
AA seq
712 aa
AA seq
DB search
MFNKIVKEFKWGQHNVRLETGEIARQASGAVIVDIEDTVVLATVVGAKTAKPGQDFFPLT
VDYLEKTYAAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVLSL
NPEIPADIPALIGASAALAISGLPFNGPVGAARVAYLNNEYVLNPTRAQMKGSALDLVVA
GTERAVLMVESEAQQLSEEVMLGAVVFGHDQMQTAIDAIHELVREGGKPEWDWAPAPKNE
ALIARVTEIAKPELEAAYQLRNKSARSAKLKEVYAAASAKLEADAAASGTVAADKATVGN
VLFDIEAKIVRTQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVVAT
LGTKGDEQSIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVACL
PSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNKF
AVLTDILGDEDHLGDMDFKVAGTAQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHILG
KMTAAVPHTNTELSDYAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDGVV
TIASTSSEGMAEAKKRIENITAEVEVGQVYEGPVLKLLDFGAIVNILPGKDGLLHISEIV
NERVKDINDYLKEGQIVKVKVIQTDEKGRVRLSAKALLNEGAQQAEPTHPQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaaatcgtcaaagaatttaagtggggacaacacaacgtccgcctcgaaacg
ggtgagatcgctcgtcaggcaagcggcgcggtgatcgtcgatatcgaagataccgtcgtg
ctcgcgaccgtcgtcggcgcgaagaccgccaagccgggccaggatttcttcccgctgacc
gtcgattacctcgaaaagacctatgccgccggcaagattccgggtggcttcttccgccgc
gaaggccgtccgtcggaaggcgaaacgctgatttcgcgcctgatcgaccgcccgctgcgc
ccgcttttcccggaaggcttctataacgaagttcaggtcgtgatccacgtcctgtcgctg
aatcccgagattcccgcggacatcccggcgctgatcggcgcgtccgccgcgctcgcgatt
tccggtctgccgttcaacggcccggtcggcgctgcgcgcgtcgcctatctgaacaacgag
tacgtgctgaacccgacgcgtgcgcagatgaagggatcggcgctcgatctggtggtcgcc
ggtacggaacgcgcggtgctgatggtggaatcggaagcgcagcagctgtccgaagaagtg
atgctcggcgcggtcgtgttcggccacgaccagatgcagaccgccatcgacgcgattcac
gaactcgtgcgcgaaggcggcaagccggagtgggactgggcgcccgcgccgaagaacgaa
gcgctgatcgcgcgcgtcaccgagatcgccaagccggaactcgaagccgcttaccagttg
cgcaacaagtcggcgcgttcggccaagctgaaggaagtgtacgcagcggcgtcggcaaag
ctggaagcagatgccgccgcgagcggcacggtcgccgccgacaaggcaacggtcggcaac
gtgctgttcgacatcgaagcgaagatcgtccgtacgcagatcctgaacggcgagccgcgc
atcgacggccgcgacacgcgcacggtccgtccgatcgaaatccgcacgggcgtcctgccg
cgcacgcacggttcggcgttgttcacgcgtggcgagacgcaggcgctggtcgtcgcgacg
ctcggcacgaagggcgacgagcaaagcatcgacgcgctcgaaggcgaataccgcgagcgc
ttcatgctccactacaacatgccgccgttcgcgacgggcgaaaccggccgcgtcggttcg
ccgaagcgccgtgaaatcggccacggccgtctcgccaagcgcgcgctcgtcgcgtgcctg
ccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcacggaatcgaac
ggttcctcgtcgatggcttcggtctgcggcggctgcctcgcgctgatggacgccggtgtg
ccgatgaaggcgcacgtcgcgggcatcgcgatgggcctgatcctcgaaggcaacaagttc
gcggttctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttcaaggtg
gccggcacggcgcaaggcgtgaccgcgctgcagatggacatcaagatccagggcatcacg
aaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcacatcctcggc
aagatgacggctgcggttccgcacacgaacacggaactgtcggactacgcgccgcgcatg
atcaccatcaagatcaatccggagaagatccgcgacgtgatcggcaagggcggttcggtg
atccgcgcgctgacggaagaaaccggcacgaccatcgacatttcggacgacggcgtcgtg
acgatcgcgagcacgtcgagcgaaggcatggcggaagccaagaagcgcatcgagaacatc
acggcggaagtggaagtgggtcaggtctacgaaggcccggtgctcaagctgctcgacttc
ggcgcgatcgtgaacatcctgccgggcaaggacggtttgctgcacatctcggaaatcgtc
aacgagcgcgtgaaggacatcaacgattacctgaaggaaggccagatcgtgaaggtcaag
gtcatccagacggacgaaaagggccgcgtgcgcttgtcggcgaaggcgctgctgaacgaa
ggcgcgcagcaggcggaacccacgcacccgcagcagtaa
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