Caballeronia cordobensis: BRPE67_ACDS18670
Help
Entry
BRPE67_ACDS18670 CDS
T03604
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bue
Caballeronia cordobensis
Pathway
bue03420
Nucleotide excision repair
bue03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRPE67_ACDS18670 (uvrD)
03430 Mismatch repair
BRPE67_ACDS18670 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ACDS18670 (uvrD)
Enzymes [BR:
bue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRPE67_ACDS18670 (uvrD)
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRPE67_ACDS18670 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BRPE67_ACDS18670 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAO86922
LinkDB
All DBs
Position
1:complement(2017969..2020335)
Genome browser
AA seq
788 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSALLPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTSDQLSA
IKRLMKGLNVDDEKYPAKNLQYFINNAKEQGLRPKDVDATDAFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCHELLAHNPPLRAHYQARFRNILVDEFQDTNKLQYAWLKLLAGEHNAI
FAVGDDDQSIYAFRGANVGNMRDFENEFRVRNLIKLEQNYRSHGHILDTANYLIANNARR
LGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEIKALINTGIARGEVAVLYRSNAQSRTI
EHTLVNAGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQVADAARLYNCSMAAAVPYVTGKAGSSLGAFATLIAKMRAETQQMSLPETVEYVVRASG
LAAFYETEREGQDRLENLQELVNAAAAFVSEEGYGLDTPARSIPLRPGATAAPEIVSEDG
EIEVLDAPTITDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFT
AVFITGLEEGLFPHENSAQESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRYNI
RSRFFDELPEGSLKWLTPKMEAGARWGGRSDNAGWGRDWFARPGQERGGASGYARDQGAS
AALPSFANEQRAADAGFKVGQAVFHTKFGEGTVTALEGSGGDARAQVRFKRHGEKWLALS
VAKLQAVE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgcttgcgaatctgaaccccgaacaactcgccgccgtgacgctgccgaac
gagcccgcgctcattctcgcgggcgccggcagcggcaagacgcgcgtgctcatcacgcgc
atcgcgtggctgatccagcagggctacgcgtcgccgccgaccgtgctcgccgtgaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtccgcgcttctgcccatcgatacg
cgcggcatgtggatcggcacctttcacggcctgtgcaaccgcatgctgcgcgcgcattac
cgcgacgccggcctgccgcagactttccagattctcgacacatcggaccagctttcggcc
atcaagcggctgatgaagggcctgaacgtcgacgacgaaaagtatccggcgaagaacctc
cagtacttcatcaacaacgcgaaggagcagggcctgcgtccgaaagacgtcgacgccacc
gacgcgttcaatcgcaagttcgtcgagctttacgaagcctacgaccagcaatgccagcgc
gaaggcgtggtggattttccggaactgctgttgcgctgtcatgaactgctcgcgcacaac
ccgccgctgcgcgcgcattatcaggcgcgtttccgcaatattctcgtcgacgagtttcag
gacacgaacaagctgcaatacgcgtggctgaagctgctcgcgggcgagcacaacgcgatc
ttcgccgtgggcgacgacgaccagtccatttacgcgttccgtggcgcgaacgtcggcaac
atgcgcgatttcgagaacgaattccgcgtgcgcaatctcatcaagctggagcagaactac
cgctcgcacggccatattctcgacacggcgaactacctgatcgcgaacaacgcgcggcgg
ctcggcaagaatctgcgcaccgacgcgggccacggcgagccggtgcgcgtctacgaggcc
gcgacggattcacaggaagcgggctggatcgtcgaggaaatcaaggcgctcatcaacacg
ggcatcgcgcgcggcgaggtcgcggtgctgtaccggagcaacgcgcagtcgcgcacgatc
gaacatacgctcgtgaacgcgggcattccgtatcgcgtctatggcggcttgcgctttttc
gagcgtcaggaagtgaagcacgcgctcgcgtatctgcgtctcatcgacaatccgaacgac
gacaccgccttcgcgcgcgtagtcaattttccgacgcggggcatcggcgcgcgctccatc
gagcaggtggcggacgccgcgcgtctctataactgttcgatggccgccgccgtgccgtat
gtcaccggcaaggcgggatcgagcctcggcgcgttcgcgacgctcatcgcgaagatgcgc
gccgagacgcagcagatgagcctgcccgaaacggtcgaatacgtcgtgcgcgcgagcggt
ctcgccgcgttctacgaaaccgagcgcgaagggcaggaccggctggagaacttgcaggaa
ctcgtgaacgcggcggcggcgttcgtcagcgaagaaggctacggcctcgacacgcccgcg
cgctcgattccgctgcgccccggcgcgacggccgcgcccgagatcgtcagcgaggacggc
gaaatcgaagtgctcgatgcgccgaccatcaccgatcccgcgcaaaaccccgacaccatg
acgccgctcgccggctttctgtcgcacgcctcgctcgaagccggcgacaaccaggcgcaa
gccggccaggatgccgtgcaactgatgaccgtgcacgcggcgaagggcctcgaattcacg
gcggtgttcatcaccggtctcgaagaagggctgttcccgcacgagaacagcgcgcaggaa
tcggacgggctggaagaagaacgccgtctcatgtacgtggcgatcacgcgcgcgaaggag
cggctttatctgtcgttcgcgcaaagccgcatgctgcatgggcagacgcgctacaacatc
cgttcccgtttcttcgacgaattgcccgaaggctcgctcaaatggctcacgccgaagatg
gaagcgggcgcgcgctggggcggccgttcggacaacgccggctggggccgcgactggttc
gcgcgtccggggcaggaacgcggcggcgcttcgggctatgcgcgcgatcagggcgcgagc
gctgcgctgccgtcgttcgccaacgagcagcgcgcggccgatgcgggcttcaaggtcggt
caggcggtcttccacacgaagttcggcgaaggcaccgtgaccgcgctcgaaggctccggc
ggcgatgcgcgcgcccaagtgcgcttcaaacgccacggcgagaaatggctcgcgctctcg
gtcgcgaaactgcaggccgtcgaatga
DBGET
integrated database retrieval system
