Caballeronia cordobensis: BRPE67_ACDS20480
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Entry
BRPE67_ACDS20480 CDS
T03604
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bue
Caballeronia cordobensis
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bue03032
]
BRPE67_ACDS20480 (ihfB)
03036 Chromosome and associated proteins [BR:
bue03036
]
BRPE67_ACDS20480 (ihfB)
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ACDS20480 (ihfB)
DNA replication proteins [BR:
bue03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BRPE67_ACDS20480 (ihfB)
Chromosome and associated proteins [BR:
bue03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BRPE67_ACDS20480 (ihfB)
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BRPE67_ACDS20480 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BAO87103
LinkDB
All DBs
Position
1:complement(2207360..2207689)
Genome browser
AA seq
109 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSEALANGHRIEIRGFGSFGLNRRPSRV
GRNPKSGEKVLVPEKFVPHFKPGKELRERVDGRAGEPLKASNDDDADDL
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaagtgaattggtcgcccagttggcgtcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaagacgatgctcgatgcgatgtcggaggccctggccaacggt
catcgtatcgagattcgcggcttcggcagctttgggctcaatcgtcgtccgtcgcgcgtc
gggcgtaatcccaagtcgggcgagaaagtgctggtgccggagaaattcgtgccgcacttc
aagccgggcaaggaattgcgcgaacgcgtcgacggccgcgcgggcgagccgctcaaagct
tcgaatgacgacgatgcggacgatctctga
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