Caballeronia cordobensis: BRPE67_ACDS25330
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Entry
BRPE67_ACDS25330 CDS
T03604
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bue
Caballeronia cordobensis
Pathway
bue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRPE67_ACDS25330 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bue03019
]
BRPE67_ACDS25330 (recQ)
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ACDS25330 (recQ)
Enzymes [BR:
bue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRPE67_ACDS25330 (recQ)
Messenger RNA biogenesis [BR:
bue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRPE67_ACDS25330 (recQ)
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRPE67_ACDS25330 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAO87588
LinkDB
All DBs
Position
1:complement(2732259..2734106)
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AA seq
615 aa
AA seq
DB search
MSRSLEILNEIFGYPAFRGQQAEIVEHVAGGGDSLVLMPTGGGKSLCYQIPSLVRREAGL
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSGAEAAATERALRNGEIDLLYVAPER
LMTPRFLDLLDSSPVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIVHRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNKDGTTDAG
VVYCLSRRKVEETADWLKGQGVRALPYHAGMEFETRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESEADD
AHKRVQTGKLDALLGLCEVASCRRVRLLAYFGETSTPCGNCDTCLEPPASFDATREAQMA
LSCVYRAQRASGFHFGAGHLIDILRGTRSEKVLQRGHEKISTFGVGAALSEPEWRAVFRQ
LVAFGFLAVDHEGFGSLVLTDASKPVLKGEERVTLRKYVKPTRARSSSSRTGERADPTAG
MSSREKSRWERLRAWRAETAKSDGVPAYVIFHDATLAEIARSDPDTVDDLRHIPGIGVRK
LERFGDELLDVVGSD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtcgctcgaaatactcaacgaaatcttcggctatcccgcgtttcgcggacaa
caggcggagatcgtcgagcacgtcgcgggcggcggcgattcgctcgttctcatgcccacg
ggcggcggcaagtcgctctgctatcagatcccgtcgctcgtgcggcgcgaggcggggctt
ggcgcggggatcgtcgtgtcgccgctgatcgcgctgatgcaggatcaggtcgccgcactg
acggaagtcggcgtgcgcgccgcgtacctcaattcgacgctctccggcgccgaagccgcc
gcaaccgaacgcgcgttgcgcaatggcgaaatcgacctgctgtacgtcgcgcccgagcgg
ctgatgacgccgcgcttcctggatctgctcgacagctcgccggtcgggctcttcgcgatc
gacgaagcgcattgcgtgtcccaatggggtcacgatttccgccccgaatacattcagctt
tcggtgctgcacgagcgctttccgaatgtgccgcgcatcgccctcacggcgaccgcggat
gcgatcacgcgcgatgaaatcgtgcatcgcttggcgctcgacgacgcgcgcatcttcgtt
tcgagcttcgatcggccgaatatccgctatcgaatcgtcgagaaggacaacgcgcgctcg
cagttgctcgatttcatccgcgcggaacatacgaacaaggacggcacgactgatgcgggc
gtcgtctattgtctgtcgcgccgcaaggtcgaggagaccgcggactggctgaaggggcaa
ggcgttcgcgcgctgccatatcacgcgggcatggaattcgagacgcgccagaagcatcag
gaaatgtttcagcgcgaggaaggcatcgtcatgtgcgcgacgatcgccttcggcatgggc
atcgacaagccggatgtgcgcttcgtcgcgcatctggatttgccgaagagcgtcgagggc
tactatcaggaaaccgggcgcgccggccgtgacggtctgccggcgaacgcgtggatggcc
tatggactgggcgacgtcgttcagcagcgcaagatgatcgacgagtccgaagcggacgac
gcgcacaagcgcgtgcagactggcaagctcgatgcgttgctcggcctgtgtgaagtcgcg
tcatgccgccgcgtgcgcctgctcgcgtacttcggcgagaccagcacgccgtgcggcaat
tgcgatacgtgtctggagccgcccgcttccttcgatgccacgcgcgaggcgcagatggcg
ctgtcgtgcgtctatcgggcgcaaagggcgagcggattccattttggcgcgggtcatctc
atcgatattcttcgcggcacgcgcagcgaaaaagtgctgcaacgcggccacgaaaagatt
tctacgttcggcgtaggggcggcgctgtccgaacccgaatggcgtgcggtgtttcggcaa
ctcgtcgcgttcggctttctcgcggtcgatcacgagggcttcggctcgctcgtgctgacc
gacgccagcaagccggtgctcaaaggcgaagaacgcgtgacgctgcgcaagtacgtgaag
cccacgcgggcccggtcgtcttcgagccgcacgggcgaacgcgccgatccgaccgcgggc
atgtcgtcgcgcgagaagtcccgctgggagcggctgcgcgcctggcgtgccgaaaccgcg
aaaagcgatggcgtgccggcgtatgtcatcttccacgatgccaccctcgcggaaatcgcg
cgaagcgatcccgataccgtcgacgatctgcgccatattccgggtatcggcgtgcgcaag
ctcgaacgcttcggcgatgaactgctcgatgtcgtcgggtcggactga
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