Caballeronia cordobensis: BRPE67_ACDS27670
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Entry
BRPE67_ACDS27670 CDS
T03604
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bue
Caballeronia cordobensis
Pathway
bue00300
Lysine biosynthesis
bue00470
D-Amino acid metabolism
bue01100
Metabolic pathways
bue01110
Biosynthesis of secondary metabolites
bue01120
Microbial metabolism in diverse environments
bue01230
Biosynthesis of amino acids
Module
bue_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BRPE67_ACDS27670 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRPE67_ACDS27670 (dapF)
Enzymes [BR:
bue01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BRPE67_ACDS27670 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CitF
DUF6285
Motif
Other DBs
NCBI-ProteinID:
BAO87822
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All DBs
Position
1:complement(2988635..2989507)
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AA seq
290 aa
AA seq
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MKLKFTKMQGAGNDFVVLDGYSQALDLSAEQVRALANRHFGVGADQLLLVEKPTIEGVDF
KYRIFNCDGGEVEHCGNGARCFVKFVRDRGLTNASSVRVQVQNGVITLSVQENGEVVVDM
STPVFDPPHVPFDAQALEGLRQGHDTLWPLDVSGETRWISAVSMGNPHAVQTVEDVEAYP
VLTEGPLIERHARFPKRVNAGFMQIVDRQTVKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDSPVRVHTHGGTLTISWDGARDESAALFMAGPAATVFEGEIELDRIV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaagatgcaaggcgcgggcaacgacttcgtcgtgctcgacggc
tactcgcaggcgctcgatctcagcgcggaacaggtgcgcgcgctcgcgaaccgtcatttc
ggcgttggcgcggatcaactgctgctcgtggaaaagccgacgatcgaaggcgtcgacttc
aaataccgcatcttcaattgcgatggcggcgaggtcgagcactgcggcaacggcgcgcgc
tgcttcgtgaagttcgtgcgcgatcgcggtctgacgaacgcatcgagcgtgcgcgtgcag
gtgcaaaacggcgtcatcacgctgtcggtgcaggagaacggcgaagtcgtcgtcgacatg
agcacgccggtgttcgatccgccgcacgtcccgttcgacgcgcaagcactcgaagggctt
cggcagggccacgacacgctctggccgctcgacgtgagcggagaaacgcgctggatttcg
gccgtctcgatgggcaatccgcacgccgtgcagaccgtcgaagacgtggaagcgtatccg
gtgctgaccgaaggccccttgatcgagcgtcacgcgcgctttccgaagcgcgtgaacgcg
ggtttcatgcagatcgtcgatcgtcagacggtcaagctgcgcgtctacgagcgcggcgcg
ggcgaaacgctcgcgtgcggcacgggcgcgtgcgcggcggtggccgcgggcatccgccgc
ggtctgctcgattcgcccgtgcgcgttcatacgcacggcggcacgctcacgatttcctgg
gacggcgcgcgcgacgaatccgccgcgcttttcatggccggccccgccgcgaccgtgttc
gaaggcgaaatcgagctcgatcgcatcgtttaa
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