Caballeronia cordobensis: BRPE67_BCDS04440
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Entry
BRPE67_BCDS04440 CDS
T03604
Name
(GenBank) uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bue
Caballeronia cordobensis
Pathway
bue03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRPE67_BCDS04440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_BCDS04440
Enzymes [BR:
bue01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BRPE67_BCDS04440
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRPE67_BCDS04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAO88358
LinkDB
All DBs
Position
2:complement(499523..500068)
Genome browser
AA seq
181 aa
AA seq
DB search
MPVQALPDILEPGLRIVFCGINPGMLAASTGQHFAGRGNRFWRTVHLAGFTPALLRPEDG
RAFLRYGCGLTTAVARPTARADHLSRIEIEAAAVSFESKMRSFAPHYIAFLGKMALSAMT
GKRDIAWGLQEDTFGGARAWVLPHPSGLNRSFSLDALVLAYRELHVAAFSTEAASASRDL
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgtgcaagcgcttcccgacattctcgaacccggcttgcgtatcgtgttttgcggc
atcaatccgggcatgctcgccgcatcgacgggacaacacttcgcgggccgaggcaatcgt
ttctggcgcacggttcatctcgcgggcttcacgcccgcgttgctgcgtcccgaagacggc
cgcgcattccttcgatatggatgcggactcaccacggccgtcgcgcgtcccacggcgcgc
gcggatcatctttcgcgcatcgagatcgaagcggcggccgtgtcgttcgaatcgaagatg
cgcagtttcgcgccacactacatcgcgtttctcggcaagatggcgctctctgcgatgacc
ggcaaacgcgatatcgcatggggacttcaggaagacacattcggcggcgcgcgcgcctgg
gtcttgccgcatccgagcggcctgaaccgctccttcagcctcgatgcgctcgtgcttgcc
tatcgcgagttgcatgttgccgccttctcgaccgaagcggcttcagcgtcgcgagacctt
gcctga
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