Burkholderia sp. RPE67: BRPE67_BCDS16590
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Entry
BRPE67_BCDS16590 CDS
T03604
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bue
Burkholderia sp. RPE67
Pathway
bue00260
Glycine, serine and threonine metabolism
bue01100
Metabolic pathways
Module
bue_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BRPE67_BCDS16590
Enzymes [BR:
bue01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BRPE67_BCDS16590
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BRPE67_BCDS16590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
HI0933_like
FAD_binding_2
NAD_binding_7
GIDA
DAO
XdhC_C
FAD_binding_3
Thi4
Pyr_redox
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
BAO89573
LinkDB
All DBs
Position
2:complement(1753508..1756510)
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AA seq
1000 aa
AA seq
DB search
MSQKDRMSAGGRINRAIPVTFTFNGKTYQGFEGDTLASALLANGERFVARSWKYHRPRGI
ITAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAVNQKIARF
IPAGFYYKTFMWPRKLWPKYEEVIRDAAGLGEAPKQLDADRYDKCFAHCDVLVVGGGPSG
LAAAHAAGLSGARVILVDDQRELGGSLLSCRAEIDGKPALQWVQKIEAELRKMPDVKVLS
RSTAFGYQDHNLVTITQRLTEHLPVSRRQGTRELMWKVRAKRVILATGAHERPIVFGNND
LPGIMLASAVSTYLHRYAVLPGRNAVVFTNNDDAYQCALDLKAAGADVTVVDPRPAESKG
TLPAAARRYGVRVLNNAVITVAHGKYRVASVEVASYAKGQVGQKQTDLQCDLVAMSGGWS
PVLHLFAQSGGKAHWHDEKACFVPGKAMQKESSVGACAGEFSLSRGIRFGVDAGADAARA
AGHIVAKPSAVQVAEIVEAPMMPLWIVGNKELSTRGPKQFVDYQNDVSAADIYLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAGALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAIHEWHVENGAMFEDVGNWKRPWYYPKNGEDLHAAIARESLAVRQSV
GILDASTLGKIDIQGPDSAKLLNWMYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLG
EQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
HDIDFANAAFPFMSYRDGTVAGAAARVMRISFSGELAYEVNVPANVGRAVWEALMLAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KQGRKQFVGLLTDDPTIVLPEGAQIVSGPFQGDTAPMLGHVTSSYYSPILKRSIALAVVK
GGLDKMGESVLIPLANGKRITAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagatcgcatgagcgcgggcggacgcatcaaccgcgcgattcccgtgacc
ttcaccttcaacggcaagacgtatcagggcttcgaaggcgatacgctcgcttcggccctg
cttgccaacggcgagcgtttcgttgcgcgtagctggaagtatcaccgtccgcgcggcatc
atcaccgcgggcgtcgaagaaccgaatgcagtggtgcagctcgaaaccggcgcgtacacc
gtgccgaacgcgcgcgcgaccgaagtcgagctctatcaggggctcgtcgcgacgagcgtg
aacgcgaagccgagcatcgagaaagatcgcatggcggtcaatcagaagatcgcgcgcttc
attcccgcgggcttctactacaagacgttcatgtggccgcgcaagctctggccgaaatac
gaagaagtgattcgcgatgcggcgggtctcggcgaagcgccgaagcaactcgatgccgac
cgctatgacaaatgcttcgcgcattgcgacgtgctcgtggtcggcggcggaccttcgggt
ctcgcggctgcgcatgccgcgggcctgtccggtgcgcgtgtgattctcgtcgacgatcag
cgcgaactcggcggctcgctcttgtcgtgccgcgccgaaatcgacggcaagcccgcgttg
caatgggtgcagaagatcgaagccgaactgcgcaagatgcccgacgtgaaggtactttcg
cgcagcacggcgttcggctatcaggaccacaacctcgtcacgatcacgcaacgtctgacg
gaacatctgcctgtctcgcgccgtcagggcacgcgtgaactgatgtggaaagtgcgtgcg
aagcgcgtgattctcgcgaccggcgcgcatgagcgtcccatcgtcttcggcaacaacgat
ctgccgggcatcatgctggcgtcggcggtgtcgacgtatctgcatcgctatgcggtgctg
ccgggccgcaacgcggtcgtcttcacgaacaacgacgacgcgtatcaatgcgcgctcgat
ctcaaggccgcgggcgccgatgtgacggtcgtcgatccgcgtcccgccgaatcgaagggc
acgttgcccgcggccgcgcgccgctatggcgtgcgcgtgctgaacaacgcggtcatcacc
gtcgcgcatggcaagtatcgcgtggcgtcggtcgaagtggcctcgtatgcgaaaggccag
gtcggccagaagcagaccgacctgcaatgcgatctcgtcgctatgtcgggcggctggagc
ccggtgctgcatctgttcgcgcaatcgggcggcaaggcgcactggcacgacgaaaaggcg
tgcttcgttcccggcaaggcgatgcagaaagagagcagcgtcggcgcatgcgcgggcgag
ttctcgctctcgcgcggcatccgcttcggcgtcgatgcgggtgcggatgcggcgcgcgcg
gcgggtcatatcgtcgcgaagccgagtgccgtgcaggtcgccgagatcgtcgaagcgccg
atgatgccgctgtggatcgtcggcaacaaggaactgtcgactcgtggtcccaagcaattc
gtcgactatcaaaacgacgtgtccgccgccgacatttatcttgccgcgcgcgaaggcttc
gaatccgtcgagcacgtcaagcgttatacggccatgggcttcggtaccgaccagggcaag
ctcggcaacatcaacggcatggcgattctcgcgggcgcgctcggcaagacgattcccgaa
accggcacgacgaccttccgcccgaactacacgcccgtgaccttcggcacgttcgcgggc
cgcgagttgggcgagttcctcgatccggtgcgcaagaccgcgatccacgaatggcacgtc
gaaaacggcgcgatgttcgaggacgtcggcaactggaagcggccctggtactacccgaag
aacggcgaggacctgcacgcggcgattgcgcgcgagtcgctcgcggtgcgtcagagcgtc
ggcattctggatgcatcgacgctcggcaagatcgacattcaaggcccggattccgcgaag
ctgctcaactggatgtacacgaatccgtggagcaagctcgaagtcggcaagtgccgctat
ggcctgatgctcgacgaaaacggcatgatcttcgacgacggcgtgacggtgcgtctcggc
gaacagcactacatgatgacgacgaccaccggcggcgcggcgcgcgtgctgacgtggctc
gaacgctggctgcaaaccgaatggcccgacatgcgcgtgcgtctcgcatccgtcacggat
cactgggcgacgttcgcggtcgtcggcccgaacagccgcaaggtgctgcagaaggtgtgt
cacgacatcgacttcgcaaatgcggcgttcccgttcatgagctatcgcgacggcacggtg
gcgggcgcggcggcgcgcgtgatgcgcatcagcttctcgggcgagcttgcctatgaagtg
aacgtgccggcgaacgtcggacgcgcggtgtgggaagcgctgatgctcgcgggcgcggaa
ttcgatatcacgccgtacggcaccgaaacgatgcacgtgttgcgcgcggagaagggctac
atcatcgtcggtcaggatacggatggctcgatgacgccttacgacctcggcatgggcggg
ctcgtggcgaagtcgaaagacttcctcggcaagcgttcgctcacgcgttcggatacggcg
aagcagggacgcaagcagttcgtcggcctgctgaccgacgaccccacgatcgtgctgccc
gaaggcgcgcagatcgtatcgggtccgttccagggcgacaccgcgccgatgctcggtcac
gtcacgtcgagttattacagtcccattttgaagcgctcgatcgcgctcgccgtcgtgaag
ggcggtctcgacaagatgggcgaatcggtgctgatcccgcttgcgaacggcaagcgcatc
accgcgaaaatcaccagttcggtgttctacgacagcgaaggagcacgtcagcatgttgaa
tga
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