Caballeronia cordobensis: BRPE67_CCDS02000
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Entry
BRPE67_CCDS02000 CDS
T03604
Name
(GenBank) spermidine/putrescine ABC transporter ATPase subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
bue
Caballeronia cordobensis
Pathway
bue02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BRPE67_CCDS02000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bue02000
]
BRPE67_CCDS02000
Transporters [BR:
bue02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BRPE67_CCDS02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
AAA_25
AAA_22
AAA_16
DO-GTPase2
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BAO89802
LinkDB
All DBs
Position
3:220043..221119
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AA seq
358 aa
AA seq
DB search
MDARAKTGVSIKAATKRYGAVTALEDVSLDIAPGEFVSLLGPSGSGKTTLLGILGGFVQP
SSGSVWVGERDITFAPPHKREIGIVFQNYALFPHMTVGENVAFSLRARREPKSTWAKRVA
EALAMVELKGYESRSIHQLSGGQKQRVALARAIVFQPQLILMDEPLSALDKQLRETMQIE
LRRLHRQLGATIVNVTHDQREALTMSDRVAVLKDGRLVQIDTPERLYDRPCDAFVASFIG
EATMLDVVRAGDDAVRLGDTVLRTAHPLPRGEKLLLAVQTEKLVIDGEHRHANANRLSCR
VTEVLYQGESLRVFAALADGTTISLRQPGSHEARKRIPAPGGSMTVALDPQDTIVVPA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacgagcaaagacaggcgtgtcgatcaaggccgcgaccaagcgctacggcgcg
gtgacggcactcgaagacgtatcgctcgatatcgcgccgggcgagttcgtctcgctgctc
ggaccctccggctcgggcaagaccacgctgctcggcattctcggcggcttcgtgcagccg
tcttcgggcagcgtgtgggtcggcgagcgtgacataacatttgcgccgccgcacaaacgc
gaaatcggcatcgtgtttcagaactacgcgctctttccgcatatgaccgtgggcgagaac
gtcgcgttctcgctgcgcgcgcgacgcgagccgaaatcgacatgggcgaaacgcgttgcg
gaagcgctcgcgatggtcgagctcaaagggtatgaaagccgcagcatccatcagctttcg
ggcggacagaagcaacgcgtcgcactggcgcgcgcgatcgtctttcagccgcaactcatt
ctgatggacgagccgctctccgcgctcgacaagcaattgcgcgagaccatgcagatcgaa
ttgcgcaggctgcaccggcaactcggcgcgaccatcgtcaacgtgacgcacgatcagcgc
gaagccctcaccatgagcgatcgcgtcgcggtattgaaggacggcaggctcgtgcagatc
gatacgccggaacgcctttacgaccggccctgcgatgcgttcgtcgcgagcttcatcggc
gaagcgacgatgctcgatgtcgtgcgcgccggcgacgatgccgtgcgtctcggcgatacc
gtcctgcgcacggcgcaccccttgccgcgcggcgaaaaactcctgctcgcggtgcagacg
gaaaaactcgtcatcgacggcgagcatcgtcatgcgaacgccaatcgtctttcgtgccgc
gtgaccgaagtgctgtatcagggcgagagcctgcgtgtgttcgccgcgctcgccgacggc
accacgatcagtcttcgccagcccggcagccatgaagcgcgcaagcgcattccggccccg
ggcgggtcgatgaccgtcgcgctcgatccgcaggacacgatcgtcgtgccggcctga
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