Caballeronia cordobensis: BRPE67_CCDS02220
Help
Entry
BRPE67_CCDS02220 CDS
T03604
Name
(GenBank) extracellular solute-binding protein family
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bue
Caballeronia cordobensis
Pathway
bue02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BRPE67_CCDS02220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bue02000
]
BRPE67_CCDS02220
Transporters [BR:
bue02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BRPE67_CCDS02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
BAO89824
LinkDB
All DBs
Position
3:complement(240936..241985)
Genome browser
AA seq
349 aa
AA seq
DB search
MKLSRTLASLAALVALGVASTSAWSQSKTIYIGMNGGPMEKAYTSGVLPDFEKANNVKVV
VVPGTSSDVLAKLLANRNSPQIHVAFLDDGVMARAVSMGVCEKLDDSPVLKELYPFARLK
DDMGAGVQLGMTGIGYNTKLFKEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFL
AINRLLGGSEKNVEPGFSKWATTVGPNVVEYIPNSAKLSEMITTGEAGLFPLTPTAIGDL
KDKGLPVAYVAPKEGAVLLLVDLCVVKNNPDPALAQKLAQFLLSAPAQTKAAEAGKQIPT
NSQAKMTPEMDKNLGDLNALVKKVTVVDWDTINANRAQWDKRWNQQIEK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtcccgcacactcgcctcgcttgccgcgctcgtcgctctcggcgtcgcgtcg
acgtccgcctggtcgcagagcaagactatctatatcggcatgaacggcgggccgatggaa
aaggcctatacgagcggcgtcctgcccgacttcgaaaaagccaataacgtgaaggtcgtc
gtggtgccgggcacgtcgtccgatgtgctcgcgaaactgctcgcgaaccgcaacagcccg
cagattcacgtcgcgtttctcgatgacggcgtgatggcgcgggcggtcagcatgggcgtg
tgcgagaagctcgacgattcgcccgtgctcaaggagctctatccgttcgcgcgcctgaag
gacgacatgggcgcgggcgtgcagctcggcatgacgggcatcggctacaacacgaagctc
ttcaaggaaaagggctgggcgccgccgacctcgtggatggatttcgccgatccgaagtac
aagggcaaggtcgtgttccagtcggcgtcgagcagcacgttcggcctgcacggcttcctt
gcgatcaaccgtctgcttggcggaagcgaaaagaacgtcgagccgggtttcagcaaatgg
gcgacgacggtcggcccgaatgtcgtcgaatacattccgaactcggccaagctctcggag
atgatcacgacgggcgaagccggcctctttccgctcacgccgaccgctatcggcgatctg
aaggacaagggcttgccggtcgcctatgtcgcgccgaaggaaggcgcggtgctgctgctc
gtcgatctgtgcgtcgtgaagaacaatccggacccggcgctcgcgcaaaagctcgcgcag
ttcctgctgtccgcgcctgcgcagacgaaggcagccgaagcgggcaagcagattcccacc
aactcgcaggcgaagatgacgcccgagatggacaagaatctcggcgatctcaatgcgctc
gtgaagaaagtgaccgtcgtggactgggacacgatcaacgcgaatcgcgcgcagtgggac
aagcgctggaatcagcagatcgagaagtga
DBGET
integrated database retrieval system
