Caballeronia cordobensis: BRPE67_CCDS02310
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Entry
BRPE67_CCDS02310 CDS
T03604
Name
(GenBank) probable DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
bue
Caballeronia cordobensis
Pathway
bue03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BRPE67_CCDS02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_CCDS02310
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BRPE67_CCDS02310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BAO89833
LinkDB
All DBs
Position
3:complement(249678..250604)
Genome browser
AA seq
308 aa
AA seq
DB search
MPARSIASLSLSFGLVSIPVKLYSATESASDVRFNLLAPDGARVKQQYVSDATGEVVERS
AMKKGYEFEKGRYVVFTGDELKALEEGASHVVEIVSFVPEKSVDPIFYDKAYFIAPDKRG
GKPYSLLQQALAQSGRCALAKWSYKGKTRVVQVRPAEDGMVFQQLLFADEVRSLKDLNIE
HVSVSDAELKLALQIIEQGTEDAYDAAAYEDEEKKRILAAIDRKIEGKEVVSPQAEEPAA
GGEVIDLMEALRASLAKTSAKPKAAGPAKRKAAAAEAEEAIDVPKVRKPAARAQKVAAEA
PARTRARK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacgctcgattgcgtctctgtcactctcgttcggactcgtctcgatacccgtc
aagctctactcggcgacggagagcgcgtcggacgtccgcttcaatcttctcgctccggac
ggcgcgcgcgtcaaacagcaatacgtatccgatgccacgggcgaagtcgtcgaacggtca
gccatgaaaaagggctacgagttcgaaaaaggccgctatgtcgtcttcacgggcgacgaa
ctgaaggcgctggaagaaggcgcgagccatgtcgtcgaaatcgtttcgttcgtgccggag
aaatccgtcgatccgatcttctatgacaaggcctatttcatcgcgcccgacaagcgcggc
ggcaagccgtacagtctgctccagcaggcgctcgcgcaaagcggacggtgcgcgctggcg
aagtggtcgtacaagggcaagacccgcgtggttcaggtgcgccccgccgaagatggcatg
gtcttccagcaactccttttcgccgacgaagtgcgttccctcaaggatctgaatatcgag
catgtgtcggtgtcggatgcggagttgaagctcgcgcttcagatcatcgagcaaggcacc
gaagacgcctacgacgccgccgcctacgaagacgaggagaagaaacgcattctcgccgcg
atcgaccggaagatcgagggcaaggaggtcgtctcgccgcaagccgaagaacccgcggcg
ggtggcgaagtcatcgacctgatggaggcgttgcgcgcaagcctcgccaaaacgagcgcc
aagccgaaggccgcggggccggcaaagcgcaaggccgcggcggcggaagccgaagaagcc
atcgacgtgccgaaggtcagaaagcccgccgcgcgggctcagaaagtcgcggcggaagcg
ccggccaggacgcgtgcgcgcaagtga
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