KEGG   Caballeronia cordobensis: BRPE67_CCDS02310
Entry
BRPE67_CCDS02310  CDS       T03604                                 
Name
(GenBank) probable DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
bue  Caballeronia cordobensis
Pathway
bue03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bue00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BRPE67_CCDS02310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bue03400]
    BRPE67_CCDS02310
DNA repair and recombination proteins [BR:bue03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BRPE67_CCDS02310
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: BAO89833
LinkDB
Position
3:complement(249678..250604)
AA seq 308 aa
MPARSIASLSLSFGLVSIPVKLYSATESASDVRFNLLAPDGARVKQQYVSDATGEVVERS
AMKKGYEFEKGRYVVFTGDELKALEEGASHVVEIVSFVPEKSVDPIFYDKAYFIAPDKRG
GKPYSLLQQALAQSGRCALAKWSYKGKTRVVQVRPAEDGMVFQQLLFADEVRSLKDLNIE
HVSVSDAELKLALQIIEQGTEDAYDAAAYEDEEKKRILAAIDRKIEGKEVVSPQAEEPAA
GGEVIDLMEALRASLAKTSAKPKAAGPAKRKAAAAEAEEAIDVPKVRKPAARAQKVAAEA
PARTRARK
NT seq 927 nt   +upstreamnt  +downstreamnt
atgccggcacgctcgattgcgtctctgtcactctcgttcggactcgtctcgatacccgtc
aagctctactcggcgacggagagcgcgtcggacgtccgcttcaatcttctcgctccggac
ggcgcgcgcgtcaaacagcaatacgtatccgatgccacgggcgaagtcgtcgaacggtca
gccatgaaaaagggctacgagttcgaaaaaggccgctatgtcgtcttcacgggcgacgaa
ctgaaggcgctggaagaaggcgcgagccatgtcgtcgaaatcgtttcgttcgtgccggag
aaatccgtcgatccgatcttctatgacaaggcctatttcatcgcgcccgacaagcgcggc
ggcaagccgtacagtctgctccagcaggcgctcgcgcaaagcggacggtgcgcgctggcg
aagtggtcgtacaagggcaagacccgcgtggttcaggtgcgccccgccgaagatggcatg
gtcttccagcaactccttttcgccgacgaagtgcgttccctcaaggatctgaatatcgag
catgtgtcggtgtcggatgcggagttgaagctcgcgcttcagatcatcgagcaaggcacc
gaagacgcctacgacgccgccgcctacgaagacgaggagaagaaacgcattctcgccgcg
atcgaccggaagatcgagggcaaggaggtcgtctcgccgcaagccgaagaacccgcggcg
ggtggcgaagtcatcgacctgatggaggcgttgcgcgcaagcctcgccaaaacgagcgcc
aagccgaaggccgcggggccggcaaagcgcaaggccgcggcggcggaagccgaagaagcc
atcgacgtgccgaaggtcagaaagcccgccgcgcgggctcagaaagtcgcggcggaagcg
ccggccaggacgcgtgcgcgcaagtga

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