Caballeronia cordobensis: BRPE67_CCDS13260
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Entry
BRPE67_CCDS13260 CDS
T03604
Name
(GenBank) porin
KO
K03285
general bacterial porin, GBP family
Organism
bue
Caballeronia cordobensis
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
BRPE67_CCDS13260
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
BAO90928
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Position
3:complement(1445923..1447101)
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AA seq
392 aa
AA seq
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MNKLLITGATTMITLTSAAHAQSSVTLYGLIDAGLTYTSNERTAPGSGHSSWQMTSGAVQ
DSRWGLRGAEDLGAGMKAVFALESGFDVNNGQYTSGNRIFNRQAWVGVSSREYGALTLGR
QTDLMVDFVAPLSLTGTEFGGTHFAHPFDIDNLNDSFQINNAVKYMSPAFYGFRLGALYG
FSNQAGGFTNNRAYSFGLSYVSGAWNFAVGYLQLNSSARTPAQLNANGAVTDTTAASLQS
ALTTSAVPIGVLADKQRTLGAGVNYTFGPAVAGFVYSQSKITRFFQTNLSVNFQNFEGNF
RYAFTPAVEFSGAYTYSRAGGNGGGGIPHWNQVSAMADYRLSRRTDVYVQGAWQRVSPSG
TSPLGVAWINGVSNPSSTTTQVQASAGLRHRF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagttgctgataaccggtgcgacgacgatgatcacgctgacgagcgcggcgcat
gcgcaaagcagcgtcacgctctatggtctgatcgacgcgggcttgacctacacgagcaac
gaaagaaccgcccccggcagcggccatagcagctggcagatgacgagcggcgcggttcag
gacagccgatggggcctgcgaggggccgaagatctgggcgcggggatgaaggccgtcttc
gccctcgaaagcggcttcgacgtgaataacggccagtacacgtcgggcaaccgcatcttc
aaccgtcaggcgtgggtcggcgtgtcgagccgcgaatacggcgcgctcacgctcggccgg
cagaccgacctcatggtcgatttcgtcgcgccgctttcgctgaccggcacggaattcggc
ggcacgcatttcgcccatccgttcgacatcgacaatctgaacgattcgtttcagatcaac
aacgctgtgaagtacatgagcccggcattctacggcttccgactcggcgcgttgtacggc
ttttcgaatcaggcgggcggattcaccaacaaccgcgcctacagcttcggcctgtcgtat
gtgagtggcgcatggaacttcgccgtcggctatcttcagttgaacagttctgcgcgcacg
ccggcccagttgaacgcgaacggcgcggtcacggacaccacggccgcgtcgctgcaaagc
gcgctgaccacgagcgccgtgccgatcggcgtgctggccgacaagcagaggacgctgggc
gcgggcgtcaactacacgttcggcccggccgtggcgggcttcgtgtattcgcagagcaag
atcacacggttcttccaaacgaacctgagcgtgaacttccagaacttcgagggcaacttc
cgctatgcgttcacgcccgcggtcgagttttcgggcgcgtacacctattcgcgcgccggc
ggcaacgggggcggcggcattcctcactggaaccaggtgagcgcgatggccgactaccgc
ctgtcgcgccgcaccgatgtctatgtgcagggcgcgtggcagcgcgtgagcccgagcggc
acttctccgctgggcgtggcgtggatcaacggcgtgagcaatccgtcctcgacgacgacg
caggttcaggcgtcggccggactgaggcaccgcttctga
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