Burkholderia sp. RPE67: BRPE67_DCDS00550
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Entry
BRPE67_DCDS00550 CDS
T03604
Symbol
ompC
Name
(GenBank) OmpC family outer membrane porin
KO
K03285
general bacterial porin, GBP family
Organism
bue
Burkholderia sp. RPE67
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
BRPE67_DCDS00550 (ompC)
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Gene cluster
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Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
BAO91210
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Position
p1:48388..49545
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AA seq
385 aa
AA seq
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MKKTLLIAGILGTFAAAAHAQSSVTLYGTLDAGLVYTNNSGGHNNWQQGSGALSDTYFGL
KGTEDLGGGLHALFKLESGFNLNNGRYTESNTMFNRQAYVGLQHDQYGTVTLGRQYDSMV
DYLAPLSEAGSGFGNNMAGHPFDNDNLDHSFSIKNSVKYQSANYAGFKFGGLYGFSNDAG
EFSNNRAWSAGASYGNGPLNFAAAYLQTNNSRNGTNANGAVSAGQGNNANLTAELQRTFG
AGVNYTYGPAQVGFVWTNTHYDQLLAASQGGTSIAIPGNTNLHLNNFELNGRYALTPALA
LDAAYTYTDGKVTGSNGSGDPKWHTVSLQADYSLSKRTDVYVEGVYQHASGDLGNAGANV
AMINTLSPSSTQNQVAATVGLRHRF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactcttctcatcgcgggcattctcggcacgttcgcagcggcggcccacgcg
cagagcagcgtcacgctgtacggcacgctggacgcaggtctcgtctacacgaacaattcc
ggcggccataacaactggcagcaaggcagcggcgcgctttccgatacgtatttcggcctg
aaaggcacggaagacctgggcggcggtttgcacgcgcttttcaagttggagagcggcttc
aacctgaataacggccgttacaccgaaagcaatacgatgttcaaccgccaggcttatgtc
ggcctgcaacacgatcaatacggcacggtcacgctcggccgtcagtatgattcgatggtc
gattatctcgcgccgctctcggaagcgggttcgggcttcggcaataatatggccggccat
ccgttcgataacgacaatctcgatcattcgttctcgatcaagaactcggtcaaatatcaa
agcgcgaattacgcgggcttcaagttcggcggcctgtatggcttctcgaacgacgccggc
gagttttcgaataaccgcgcatggagcgcgggcgcttcgtacggcaatggcccgctgaat
ttcgcggcggcttatctgcagacgaataactcgcgcaacggcacgaacgcaaatggcgcg
gtgtcggccggacagggcaacaacgccaatctgacggctgagttgcaacgcaccttcggc
gcgggcgtgaactacacgtacggcccggcgcaagtcggcttcgtgtggacgaacacgcac
tacgaccagttgctcgccgcgtcgcaaggcggcacgtcgatcgcgattccgggcaacacg
aacctgcatctgaacaacttcgagctgaacggccgctacgcgctcacgccggcgctcgcg
ctcgacgccgcctacacgtacacggacggcaaggtgacgggcagcaacggctcgggcgat
ccgaagtggcacacggtgtcgctgcaggccgactattcgctctcgaagcgcactgatgtc
tatgtcgaaggcgtgtatcagcacgcatcgggcgacctcggcaatgccggcgcgaacgtt
gcgatgatcaacacgctgtcgccgtcgtcgacgcagaatcaggtcgccgcgacggtcggt
ctgcgccaccgcttctaa
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