Caballeronia cordobensis: BRPE67_DCDS09730
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Entry
BRPE67_DCDS09730 CDS
T03604
Symbol
alkA
Name
(GenBank) AlkA domain protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bue
Caballeronia cordobensis
Pathway
bue03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRPE67_DCDS09730 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_DCDS09730 (alkA)
Enzymes [BR:
bue01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BRPE67_DCDS09730 (alkA)
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRPE67_DCDS09730 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
AfAlkA-like_TBP-like
DUF6777
Motif
Other DBs
NCBI-ProteinID:
BAO92128
LinkDB
All DBs
Position
p1:1035470..1036393
Genome browser
AA seq
307 aa
AA seq
DB search
MHSTFDTSTATLELPFKRPFDWTRMLKFIGGRASAGVESVEDGVYRRAIAWRGDDGAVEV
RPHARRQQLVVSVEGAAARHAEELAAPIARMFDLHADPREIARCLGGDPLLAPLVAAAPG
LRVPGAWSGFELVVRTIVGQQVSVKGASTIMNRIVQRAGRRIEGHPHEATAWRFPTPAEL
AAADLDKIGMPGKRIETVQRFAQAVATGALPLDEPGADPDILKRDMLAMPGIGPWTVGYV
AMRALRDPDAWPDADLVLMQSIARHDPSLGKPAQQRAHIERWRPWRAYAAMHLWNGVAME
TGLARGG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgacattcgacacctcgaccgccacgctggagcttccgttcaagcggcctttc
gactggacgcgcatgctgaaattcatcggcggacgcgcgtcggcgggcgtcgagtcggtg
gaggacggcgtgtaccggcgcgcgatcgcctggcgcggcgacgacggcgctgtcgaagtg
cggccgcatgcgcgcaggcagcagcttgtcgtgagcgtcgagggcgcggcggcgcgccat
gcggaagaactcgccgcgccgatcgcgcgcatgttcgacctgcatgccgatccgcgcgag
atcgcccgatgcctcggcggcgatccgctgctcgcaccgctcgtggcagccgcgcccggt
ttgcgcgtgccgggcgcgtggtccggtttcgaactcgtggtgcggaccatcgtcgggcaa
caggtgagcgtgaaaggcgcatcgacgatcatgaaccgcatcgtgcagcgcgcggggcga
cggatcgaaggtcatccgcacgaagccaccgcatggcgctttccgacgcccgccgaactc
gccgccgccgatctcgacaaaatcggcatgccggggaagcgcatcgagaccgtgcagcgc
ttcgcacaggcggtcgcgacaggcgcgctgccgctcgatgaaccgggcgccgatccggac
atcctgaagcgcgacatgctcgcgatgcccggcatcggaccgtggacggtcggctatgtg
gcgatgcgtgcgctgcgcgatcccgacgcgtggcccgacgctgatctcgttctcatgcag
tccatcgcgcgacacgatccatcgcttggcaagcccgcgcagcagcgcgcccacatcgaa
cgctggcggccgtggcgcgcctatgcggcgatgcatctatggaacggcgtcgcgatggaa
accgggcttgcgcgcggcggttga
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integrated database retrieval system
