Burkholderia sp. RPE67: BRPE67_DCDS11620
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Entry
BRPE67_DCDS11620 CDS
T03604
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)
Organism
bue
Burkholderia sp. RPE67
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
PAS_9
PAS
Motif
Other DBs
NCBI-ProteinID:
BAO92317
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Position
p1:complement(1254374..1256653)
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AA seq
759 aa
AA seq
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MQTRATDFLGTIGENVARNLPAIGLARRFDALGPLSLAVLIAACGTFFVPLPWNVALAAL
VICMALAVHRMQVAKREVFVARQVAHGLLSIAEDCLKLISLEGRIMCISEVGRRLIEADC
ADDLVGVDWLALWDGPDARHAFERAKVGESTSFSGACRTLNGKLKWWTSNFAPVYGEHGQ
VTAVLCKSRDITAEVKLIDELRGNARVQKDMEDHVDAVFWTATHDFRELLHVSSAFERMW
EMPVSALEADQTAWSQRVHADDLPALRDEMRTAVNTGAARQSYFRLCLPHDRTRWVRADI
YPVTEDGAVSRVVSVCVDATDERQRLQELHRLANTDSLTGLSNRNAMMDALVKRCESETP
FAYLFVDIDRFKSINDTAGHIAGDAVLRTIARRIQETLPDGAVAARPGGDEFTVILPGAF
EQESIARACRRLSLACHRPIAIDCKSLTMTCSIGVALYPEHGRTPEALFIGADMAMYAAK
RAGRNTFRVFGDREKDDLARAHLEAELHGAIRENQFVLHYQPQYVVESGALVGVEALLRW
DHPQLGLLAPGAFVPVLEESTLIVEAGHWVIREAVLAAARLTLALPEVRSVAVNVSPKQF
RDPRLVSVLKAAIKRGSIASHRITLEITESALIDNVDDAQEVLSNVRAMGVRIAIDDFGT
GYSSLSYLARFRPDVLKLDKTFVDNIATDTMARTVVEGVIDLAHKLGVTVVAEGVETREQ
LDALRAVRCDKVQGFLLSRPVPLDRLMTQAEEHDIALAR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacgagagcgaccgattttctcgggaccattggcgagaacgtcgccaggaacctg
ccagccatcggacttgcgcgccgtttcgatgcgctcggcccgttgtcgctcgccgtgctc
atcgccgcatgcggcacctttttcgtgccgctgccgtggaacgtggcgctcgcggcgctg
gtcatctgcatggcgcttgccgtgcatcgcatgcaggtggccaaacgcgaggtcttcgtc
gcgcgtcaggtcgcgcacgggctgctgtccatcgcggaggactgcctcaagctgatctcg
ctggaaggccgcatcatgtgcatttcggaggtcggccggcgtctcatcgaagcggactgt
gccgacgatctcgtcggcgtcgactggctcgcgctctgggacggtcccgacgcgcggcat
gcgttcgagcgtgcgaaggtgggtgaatcgacatcgttttccggcgcgtgccgcacgctg
aacggcaagctgaaatggtggacgtcgaacttcgcgccggtctatggcgagcacggccag
gtcacggccgtgctgtgcaagtcgcgcgacatcaccgcggaagtgaagctcatcgacgaa
ctgcgcggcaacgcgcgcgtgcaaaaggacatggaagatcacgtcgatgccgtcttctgg
accgcgacgcatgatttccgcgaactgctgcacgtgagctcggccttcgagcgcatgtgg
gaaatgccggtgtccgcgctcgaagccgatcaaaccgcgtggtcgcagcgcgtgcatgcc
gacgatctgcccgccctgcgcgacgaaatgcgcacggccgtgaacacgggcgcggcgagg
cagagctatttccgcctgtgcctgccgcatgaccgcacgcgctgggtgcgcgcggacatc
tatccggtcaccgaagacggcgcggtctcgcgggtcgtgagcgtgtgcgtcgacgccacc
gacgagcgtcagcgccttcaggaattgcatcggctcgcgaataccgacagcctcacgggc
ctctccaaccgcaacgcgatgatggacgcgctcgtgaagcgctgcgaatcggagacgccg
ttcgcgtatctgttcgtcgatatcgaccgcttcaagtccatcaacgatacggcggggcat
atcgcgggcgacgccgtgttgcgcaccatcgcgcggcgcatccaggagacgctgccggac
ggcgccgtggccgcgcgtcccggcggcgacgagttcacggtgatcctgcccggcgcgttc
gagcaggagagcatcgcgcgcgcgtgccgcaggctgtcgctcgcgtgccatcgtccgatc
gcgatcgactgcaagagcctgacgatgacctgctcgatcggcgtcgcgctgtatccggaa
cacgggcgcacgcccgaagcgctcttcatcggcgccgacatggcgatgtatgccgcgaaa
cgcgcgggccgcaacaccttccgcgtgttcggcgaccgcgaaaaggacgatctcgcgcgc
gcgcatctcgaagcggaattgcacggcgcgattcgcgagaatcagttcgtgctgcactat
cagccgcaatatgtcgtggagtcgggcgcgctcgtcggcgtggaggccttgctgcgctgg
gatcatccgcagctcgggctgcttgcgcccggcgctttcgtgccggtgctggaagagagc
acgctgatcgtcgaggcggggcattgggtgatccgcgaggccgtgctggcggcggcgcgc
ctcacgctcgcgctgcccgaggtgcgttcggtcgcggtcaacgtgtcgccgaagcagttc
cgcgacccgcgtctcgtgtccgtgctcaaggcggcgatcaagcgcggctccatcgcttcg
caccgcattacgctggaaatcacggaatcggcgctgatcgacaacgtcgacgacgcgcag
gaagtgttgtcgaacgtccgcgcaatgggcgtgcgcatcgccatcgacgatttcggcacg
gggtattcgagcctcagctatctggcgcgcttccggccggacgtgctgaagctcgacaag
actttcgtcgataacatcgcgaccgacacgatggcgcgcacggtcgtggaaggcgtgatc
gatctcgcgcacaagctcggcgtgacggtggtcgcggaaggcgtcgagacgcgcgagcag
ctcgacgcgctgcgcgcggtgcgttgcgacaaggtgcagggattcctgctgagccgtccc
gtgccgctggacaggttgatgacgcaggccgaggagcacgacatcgcgctcgcgcgctga
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